Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SYPP08247 Y_RNA.57-201ENST00000362806 113 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU6-509P-201ENST00000363519 107 ntBASIC1.68□□□□□ -2.14
SYPP08247 Y_RNA.191-201ENST00000363972 113 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU1-36P-201ENST00000365130 165 ntBASIC1.68□□□□□ -2.14
SYPP08247 Y_RNA.355-201ENST00000365462 98 ntBASIC1.68□□□□□ -2.14
SYPP08247 SNORD93-201ENST00000408813 74 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU7-95P-201ENST00000459222 64 ntBASIC1.68□□□□□ -2.14
SYPP08247 RNU7-171P-201ENST00000459581 62 ntBASIC1.68□□□□□ -2.14
SYPP08247 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.68□□□□□ -2.14
SYPP08247 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
SYPP08247 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SYPP08247 SNORA75.2-201ENST00000391138 150 ntBASIC1.67□□□□□ -2.14
SYPP08247 SNORA75.3-201ENST00000391231 150 ntBASIC1.67□□□□□ -2.14
SYPP08247 snoU13.21-201ENST00000459368 105 ntBASIC1.67□□□□□ -2.14
SYPP08247 RNU6-531P-201ENST00000516694 104 ntBASIC1.67□□□□□ -2.14
SYPP08247 SNORA25.16-201ENST00000516741 121 ntBASIC1.67□□□□□ -2.14
SYPP08247 MIR3202-2-201ENST00000635980 79 ntBASIC1.67□□□□□ -2.14
SYPP08247 RNU6-228P-201ENST00000362700 106 ntBASIC1.66□□□□□ -2.14
SYPP08247 RNU6-1124P-201ENST00000384169 107 ntBASIC1.66□□□□□ -2.14
SYPP08247 SNORA31.2-201ENST00000516019 134 ntBASIC1.66□□□□□ -2.14
SYPP08247 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.66□□□□□ -2.14
SYPP08247 MIR548BB-201ENST00000626714 66 ntBASIC1.66□□□□□ -2.14
SYPP08247 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
SYPP08247 RNU4-58P-201ENST00000363192 141 ntBASIC1.65□□□□□ -2.15
SYPP08247 SNORD113.3-201ENST00000364630 78 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.327-201ENST00000365201 102 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.363-201ENST00000365529 113 ntBASIC1.65□□□□□ -2.15
SYPP08247 RNU6-787P-201ENST00000384032 107 ntBASIC1.65□□□□□ -2.15
SYPP08247 Y_RNA.611-201ENST00000410682 108 ntBASIC1.65□□□□□ -2.15
SYPP08247 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.65□□□□□ -2.15
SYPP08247 RNU7-185P-201ENST00000459215 60 ntBASIC1.65□□□□□ -2.15
SYPP08247 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
SYPP08247 AC036111.3-201ENST00000526389 112 ntBASIC1.65□□□□□ -2.15
SYPP08247 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.65□□□□□ -2.15
SYPP08247 AC006160.2-201ENST00000637708 154 ntBASIC1.65□□□□□ -2.15
SYPP08247 AC023934.1-201ENST00000574529 2389 ntBASIC1.64□□□□□ -2.15
SYPP08247 SNORD115-27-201ENST00000364430 82 ntBASIC1.64□□□□□ -2.15
SYPP08247 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
SYPP08247 RNU6-53P-201ENST00000365367 106 ntBASIC1.64□□□□□ -2.15
SYPP08247 Y_RNA.426-201ENST00000384068 113 ntBASIC1.64□□□□□ -2.15
SYPP08247 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
SYPP08247 AC087499.7-201ENST00000441958 109 ntBASIC1.64□□□□□ -2.15
SYPP08247 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
SYPP08247 MIR4666B-201ENST00000578142 81 ntBASIC1.64□□□□□ -2.15
SYPP08247 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.64□□□□□ -2.15
SYPP08247 RNU6-403P-201ENST00000363163 104 ntBASIC1.63□□□□□ -2.15
SYPP08247 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.63□□□□□ -2.15
SYPP08247 RNU6-519P-201ENST00000410590 108 ntBASIC1.63□□□□□ -2.15
SYPP08247 SNORD83.1-201ENST00000411362 77 ntBASIC1.63□□□□□ -2.15
SYPP08247 RNU6-638P-201ENST00000516582 104 ntBASIC1.63□□□□□ -2.15
SYPP08247 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
SYPP08247 SNORA72.6-201ENST00000384520 129 ntBASIC1.62□□□□□ -2.15
SYPP08247 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
SYPP08247 MIR1257-201ENST00000408490 117 ntBASIC1.62□□□□□ -2.15
SYPP08247 RNU6-1194P-201ENST00000516208 104 ntBASIC1.62□□□□□ -2.15
SYPP08247 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
SYPP08247 RNU6-934P-201ENST00000365154 107 ntBASIC1.61□□□□□ -2.15
SYPP08247 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.61□□□□□ -2.15
SYPP08247 Y_RNA.648-201ENST00000459455 110 ntBASIC1.61□□□□□ -2.15
SYPP08247 snoU13.18-201ENST00000459483 104 ntBASIC1.61□□□□□ -2.15
SYPP08247 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
SYPP08247 SNORD36A-201ENST00000362874 73 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
SYPP08247 Y_RNA.224-201ENST00000364308 111 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
SYPP08247 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
SYPP08247 MIR516A2-201ENST00000384888 90 ntBASIC1.6□□□□□ -2.15
SYPP08247 MIR516A1-201ENST00000385033 90 ntBASIC1.6□□□□□ -2.15
SYPP08247 MIR1255A-201ENST00000408338 113 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU7-85P-201ENST00000458851 63 ntBASIC1.6□□□□□ -2.15
SYPP08247 SNORD4B-201ENST00000459083 72 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNU7-21P-201ENST00000459430 62 ntBASIC1.6□□□□□ -2.15
SYPP08247 RNA5SP395-201ENST00000516567 118 ntBASIC1.6□□□□□ -2.15
SYPP08247 AC106800.4-201ENST00000614905 153 ntBASIC1.6□□□□□ -2.15
SYPP08247 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
SYPP08247 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SYPP08247 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
SYPP08247 MIR519C-201ENST00000385053 87 ntBASIC1.59□□□□□ -2.15
SYPP08247 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
SYPP08247 RNU6-1254P-201ENST00000391266 104 ntBASIC1.59□□□□□ -2.15
SYPP08247 SNORD111-201ENST00000408139 94 ntBASIC1.59□□□□□ -2.15
SYPP08247 RNA5SP225-201ENST00000410874 135 ntBASIC1.59□□□□□ -2.15
SYPP08247 AL591704.2-201ENST00000421658 181 ntBASIC1.59□□□□□ -2.15
SYPP08247 AC015818.7-201ENST00000428754 109 ntBASIC1.59□□□□□ -2.15
SYPP08247 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.15
SYPP08247 RNU1-92P-201ENST00000517017 135 ntBASIC1.59□□□□□ -2.15
SYPP08247 MIR6082-201ENST00000613604 109 ntBASIC1.59□□□□□ -2.15
SYPP08247 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SYPP08247 Y_RNA.13-201ENST00000362403 112 ntBASIC1.58□□□□□ -2.16
SYPP08247 Y_RNA.437-201ENST00000384113 113 ntBASIC1.58□□□□□ -2.16
SYPP08247 RNU6-524P-201ENST00000384270 107 ntBASIC1.58□□□□□ -2.16
SYPP08247 SNORA80D-201ENST00000384488 135 ntBASIC1.58□□□□□ -2.16
SYPP08247 RNU6-910P-201ENST00000390844 107 ntBASIC1.58□□□□□ -2.16
SYPP08247 SNORD100-201ENST00000408573 76 ntBASIC1.58□□□□□ -2.16
SYPP08247 Y_RNA.607-201ENST00000410597 98 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms