Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC073869.6-201ENST00000640656 341 ntBASIC-1.6□□□□□ -2.67
APOA1P02647 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.61□□□□□ -2.67
APOA1P02647 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.61□□□□□ -2.67
APOA1P02647 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
APOA1P02647 U4.1-201ENST00000620349 87 ntBASIC-1.61□□□□□ -2.67
APOA1P02647 MIR1302-1-201ENST00000637932 143 ntBASIC-1.61□□□□□ -2.67
APOA1P02647 SNORD115-25-201ENST00000362619 82 ntBASIC-1.62□□□□□ -2.67
APOA1P02647 RNU6-690P-201ENST00000365242 106 ntBASIC-1.62□□□□□ -2.67
APOA1P02647 RNU6-571P-201ENST00000384128 107 ntBASIC-1.62□□□□□ -2.67
APOA1P02647 AL589823.1-201ENST00000429577 183 ntBASIC-1.62□□□□□ -2.67
APOA1P02647 RNU2-35P-201ENST00000516446 142 ntBASIC-1.62□□□□□ -2.67
APOA1P02647 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.63□□□□□ -2.67
APOA1P02647 RNU6-973P-201ENST00000364690 107 ntBASIC-1.63□□□□□ -2.67
APOA1P02647 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.63□□□□□ -2.67
APOA1P02647 MIR147A-201ENST00000385079 72 ntBASIC-1.63□□□□□ -2.67
APOA1P02647 RNU6-287P-201ENST00000516230 98 ntBASIC-1.63□□□□□ -2.67
APOA1P02647 MIR382-201ENST00000637119 76 ntBASIC-1.63□□□□□ -2.67
APOA1P02647 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 SNORD115-35-201ENST00000365122 82 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 MIR652-201ENST00000385278 98 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 RNU6-381P-201ENST00000391259 108 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 RNU4-69P-201ENST00000410677 143 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 SNORA40.17-201ENST00000517256 115 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.64□□□□□ -2.67
APOA1P02647 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.64□□□□□ -2.67
APOA1P02647 MIR409-201ENST00000362237 79 ntBASIC-1.65□□□□□ -2.67
APOA1P02647 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.65□□□□□ -2.67
APOA1P02647 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.65□□□□□ -2.67
APOA1P02647 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.65□□□□□ -2.67
APOA1P02647 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.65□□□□□ -2.67
APOA1P02647 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.65□□□□□ -2.67
APOA1P02647 MIR8068-201ENST00000618032 68 ntBASIC-1.65□□□□□ -2.67
APOA1P02647 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 Z83846.1-201ENST00000446798 265 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 AL121914.1-201ENST00000450188 156 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 SERF1AP1-201ENST00000514575 187 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 SNORA40.15-201ENST00000516884 107 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.66□□□□□ -2.68
APOA1P02647 RNU2-4P-201ENST00000606190 192 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.66□□□□□ -2.68
APOA1P02647 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.67□□□□□ -2.68
APOA1P02647 SNORD77B-201ENST00000391112 67 ntBASIC-1.67□□□□□ -2.68
APOA1P02647 RNU7-2P-201ENST00000516096 62 ntBASIC-1.67□□□□□ -2.68
APOA1P02647 RNU6-706P-201ENST00000517229 104 ntBASIC-1.67□□□□□ -2.68
APOA1P02647 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.67□□□□□ -2.68
APOA1P02647 AC007012.1-201ENST00000567192 175 ntBASIC-1.67□□□□□ -2.68
APOA1P02647 AC009779.6-201ENST00000603972 165 ntBASIC-1.67□□□□□ -2.68
APOA1P02647 SNORD74.6-201ENST00000364796 70 ntBASIC-1.68□□□□□ -2.68
APOA1P02647 MIR516A2-201ENST00000384888 90 ntBASIC-1.68□□□□□ -2.68
APOA1P02647 MIR516A1-201ENST00000385033 90 ntBASIC-1.68□□□□□ -2.68
APOA1P02647 SNORD19B-201ENST00000459623 84 ntBASIC-1.68□□□□□ -2.68
APOA1P02647 RNU6-850P-201ENST00000516934 103 ntBASIC-1.68□□□□□ -2.68
APOA1P02647 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.68□□□□□ -2.68
APOA1P02647 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.68□□□□□ -2.68
APOA1P02647 MIR6854-201ENST00000614935 69 ntBASIC-1.68□□□□□ -2.68
APOA1P02647 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.69□□□□□ -2.68
APOA1P02647 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.69□□□□□ -2.68
APOA1P02647 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.69□□□□□ -2.68
APOA1P02647 MIR376B-201ENST00000614515 100 ntBASIC-1.69□□□□□ -2.68
APOA1P02647 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.69□□□□□ -2.68
APOA1P02647 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 RNU6-450P-201ENST00000364654 107 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 RNU6-472P-201ENST00000384299 107 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 RNA5SP266-201ENST00000410273 108 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 FGF7P6-202ENST00000451282 293 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 RNA5SP461-201ENST00000516451 104 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.7□□□□□ -2.68
APOA1P02647 RNU6-103P-201ENST00000363686 107 ntBASIC-1.71□□□□□ -2.68
APOA1P02647 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.71□□□□□ -2.68
APOA1P02647 RNU6-905P-201ENST00000384434 107 ntBASIC-1.71□□□□□ -2.68
APOA1P02647 RNU6-476P-201ENST00000384726 107 ntBASIC-1.71□□□□□ -2.68
APOA1P02647 MIR1252-201ENST00000408861 65 ntBASIC-1.71□□□□□ -2.68
APOA1P02647 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.71□□□□□ -2.68
APOA1P02647 RNU4-17P-201ENST00000365598 141 ntBASIC-1.72□□□□□ -2.68
APOA1P02647 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.72□□□□□ -2.68
APOA1P02647 RNU6-823P-201ENST00000391042 103 ntBASIC-1.72□□□□□ -2.68
APOA1P02647 SNORD2.1-201ENST00000458762 69 ntBASIC-1.72□□□□□ -2.68
APOA1P02647 RNA5SP476-201ENST00000516613 103 ntBASIC-1.72□□□□□ -2.68
APOA1P02647 AC021443.1-201ENST00000604478 211 ntBASIC-1.72□□□□□ -2.68
APOA1P02647 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.72□□□□□ -2.68
APOA1P02647 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.73□□□□□ -2.69
APOA1P02647 RNU6-770P-201ENST00000363929 105 ntBASIC-1.73□□□□□ -2.69
APOA1P02647 RNU7-164P-201ENST00000459221 62 ntBASIC-1.73□□□□□ -2.69
APOA1P02647 AC138907.4-201ENST00000570107 226 ntBASIC-1.73□□□□□ -2.69
APOA1P02647 AL132765.2-201ENST00000610812 351 ntBASIC-1.73□□□□□ -2.69
APOA1P02647 AC087741.2-201ENST00000619415 172 ntBASIC-1.73□□□□□ -2.69
APOA1P02647 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.74□□□□□ -2.69
APOA1P02647 HAR1A.1-201ENST00000459583 118 ntBASIC-1.74□□□□□ -2.69
APOA1P02647 RNA5SP236-201ENST00000516169 116 ntBASIC-1.74□□□□□ -2.69
APOA1P02647 RNY3P15-201ENST00000516297 97 ntBASIC-1.74□□□□□ -2.69
APOA1P02647 snoU83B.1-201ENST00000517136 88 ntBASIC-1.74□□□□□ -2.69
APOA1P02647 AL365265.1-201ENST00000621045 234 ntBASIC-1.74□□□□□ -2.69
APOA1P02647 TRDV1-202ENST00000621643 102 ntBASIC-1.74□□□□□ -2.69
APOA1P02647 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms