Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIR34C-201ENST00000384831 77 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 MIR548A3-201ENST00000385297 97 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 RNU6-1194P-201ENST00000516208 104 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 AC007012.1-201ENST00000567192 175 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
CLPTM1O96005 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
CLPTM1O96005 Y_RNA.98-201ENST00000363109 102 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 SNORA63.5-201ENST00000363548 123 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 RNA5SP325-201ENST00000363756 130 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 Y_RNA.205-201ENST00000364128 113 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 SNORA36.2-201ENST00000384004 127 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 RNU6-291P-201ENST00000384720 107 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 MIR216A-201ENST00000385063 110 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CLPTM1O96005 RNU6-816P-201ENST00000390914 107 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 RNU6-1268P-201ENST00000391214 107 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 RNU6-1239P-201ENST00000391310 107 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 SNORD100-201ENST00000408573 76 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 AP003327.1-201ENST00000529684 127 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 MIR4500-201ENST00000579472 76 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 AL670379.3-201ENST00000605040 251 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 AP001362.1-201ENST00000625165 124 ntBASIC0.62□□□□□ -2.31
CLPTM1O96005 MIR101-2-201ENST00000362195 79 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 Y_RNA.32-201ENST00000362589 110 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 Y_RNA.536-201ENST00000384621 113 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 RNU6-535P-201ENST00000384722 107 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 SNORA19-201ENST00000384737 128 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 RNU6-1168P-201ENST00000390831 104 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 RNU6-1154P-201ENST00000391001 104 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 AL606753.1-201ENST00000427435 87 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 AL353813.1-201ENST00000440700 253 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 RNU6-406P-201ENST00000516470 107 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 RNU6-62P-201ENST00000516526 102 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.61□□□□□ -2.31
CLPTM1O96005 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.61□□□□□ -2.31
CLPTM1O96005 AL162726.3-218ENST00000636401 95 ntBASIC0.61□□□□□ -2.31
CLPTM1O96005 Y_RNA.155-201ENST00000363632 101 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 SNORD113-1-201ENST00000365321 69 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 RNU6-679P-201ENST00000391003 106 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 BX276092.1-201ENST00000427368 251 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 SNORA31.14-201ENST00000516728 116 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 RNU6-789P-201ENST00000517105 102 ntBASIC0.6□□□□□ -2.31
CLPTM1O96005 RNU6-363P-201ENST00000362895 105 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 RNA5SP117-201ENST00000365294 118 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 RNU6-409P-201ENST00000384114 104 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 Y_RNA.507-201ENST00000384500 99 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 Y_RNA.563-201ENST00000384707 108 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 AC138907.6-201ENST00000568401 126 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 RN7SL793P-201ENST00000583259 296 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 AL512310.12-203ENST00000640543 90 ntBASIC0.59□□□□□ -2.31
CLPTM1O96005 RNA5SP245-201ENST00000364239 121 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 RNA5SP205-201ENST00000364653 136 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 Y_RNA.360-201ENST00000365512 102 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 RNU6-429P-201ENST00000384582 108 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 Y_RNA.540-201ENST00000384638 111 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 MIR644A-201ENST00000385262 94 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 RNU6-313P-201ENST00000516317 112 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 RNU6-479P-201ENST00000516348 105 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 uc_338.16-201ENST00000621804 95 ntBASIC0.58□□□□□ -2.32
CLPTM1O96005 Y_RNA.35-201ENST00000362601 101 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 RNU6-1313P-201ENST00000362622 102 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 Y_RNA.85-201ENST00000363014 111 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 SNORD116-21-201ENST00000384507 92 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 RNU2-51P-201ENST00000410708 197 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.57□□□□□ -2.32
CLPTM1O96005 MIR4679-2-201ENST00000578358 77 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
CLPTM1O96005 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.57□□□□□ -2.32
CLPTM1O96005 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
CLPTM1O96005 Y_RNA.247-201ENST00000364500 92 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 RNU6-1144P-201ENST00000384247 104 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 RNU6-880P-201ENST00000384526 107 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 RNU6-476P-201ENST00000384726 107 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 MIR140-201ENST00000385282 100 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 MIR1912-201ENST00000410389 80 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 RNU6-1064P-201ENST00000410626 104 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 RPL39P34-201ENST00000477141 156 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 RNU6-1006P-201ENST00000516998 103 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 MIR3678-201ENST00000578455 94 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 MIR6129-201ENST00000616087 109 ntBASIC0.56□□□□□ -2.32
CLPTM1O96005 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.56□□□□□ -2.32
CLPTM1O96005 Y_RNA.309-201ENST00000365046 111 ntBASIC0.55□□□□□ -2.32
CLPTM1O96005 RNA5SP436-201ENST00000516020 115 ntBASIC0.55□□□□□ -2.32
CLPTM1O96005 RNU6-469P-201ENST00000516253 101 ntBASIC0.55□□□□□ -2.32
CLPTM1O96005 AC068339.1-201ENST00000526965 141 ntBASIC0.55□□□□□ -2.32
CLPTM1O96005 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.55□□□□□ -2.32
CLPTM1O96005 U2.22-201ENST00000636441 106 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms