Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 Y_RNA.467-201ENST00000384297 102 ntBASIC1.59□□□□□ -2.15
PRPF40AO75400 RNU6-644P-201ENST00000391155 98 ntBASIC1.59□□□□□ -2.15
PRPF40AO75400 Y_RNA.705-201ENST00000516862 110 ntBASIC1.59□□□□□ -2.15
PRPF40AO75400 AC068338.1-201ENST00000565567 176 ntBASIC1.59□□□□□ -2.15
PRPF40AO75400 RNU6-86P-201ENST00000606534 107 ntBASIC1.59□□□□□ -2.15
PRPF40AO75400 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
PRPF40AO75400 RNU6-813P-201ENST00000384691 107 ntBASIC1.58□□□□□ -2.16
PRPF40AO75400 MIR1827-201ENST00000408549 66 ntBASIC1.58□□□□□ -2.16
PRPF40AO75400 BX276092.1-201ENST00000427368 251 ntBASIC1.58□□□□□ -2.16
PRPF40AO75400 FABP5P4-201ENST00000437203 171 ntBASIC1.58□□□□□ -2.16
PRPF40AO75400 RNU6-1194P-201ENST00000516208 104 ntBASIC1.58□□□□□ -2.16
PRPF40AO75400 AL136317.1-201ENST00000612653 226 ntBASIC1.58□□□□□ -2.16
PRPF40AO75400 RNU6-571P-201ENST00000384128 107 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 MIR520F-201ENST00000384824 87 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 MIR19B1-201ENST00000384829 87 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 MIR758-201ENST00000390227 88 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 SNRPGP12-201ENST00000449481 213 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 RNU6-1053P-201ENST00000515930 101 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 RNU6-765P-201ENST00000516916 99 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 RNU1-92P-201ENST00000517017 135 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 MIR4804-201ENST00000581683 73 ntBASIC1.57□□□□□ -2.16
PRPF40AO75400 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
PRPF40AO75400 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PRPF40AO75400 Y_RNA.173-201ENST00000363776 113 ntBASIC1.56□□□□□ -2.16
PRPF40AO75400 RNU1-119P-201ENST00000391122 165 ntBASIC1.56□□□□□ -2.16
PRPF40AO75400 RNU6-972P-201ENST00000391208 107 ntBASIC1.56□□□□□ -2.16
PRPF40AO75400 AC013244.2-201ENST00000603396 103 ntBASIC1.56□□□□□ -2.16
PRPF40AO75400 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.56□□□□□ -2.16
PRPF40AO75400 MIR8066-201ENST00000617280 78 ntBASIC1.56□□□□□ -2.16
PRPF40AO75400 Y_RNA.42-201ENST00000362660 108 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 RNU6-1125P-201ENST00000363601 107 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 RNU6-480P-201ENST00000384332 107 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 MIR200A-201ENST00000384875 90 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 MIR942-201ENST00000401111 86 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 RNU6-887P-201ENST00000410660 100 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 RNU6-850P-201ENST00000516934 103 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 SNORD92-201ENST00000585078 85 ntBASIC1.55□□□□□ -2.16
PRPF40AO75400 RNU6-1298P-201ENST00000362456 101 ntBASIC1.54□□□□□ -2.16
PRPF40AO75400 RNU6-369P-201ENST00000362515 102 ntBASIC1.54□□□□□ -2.16
PRPF40AO75400 RNU6-1244P-201ENST00000363614 108 ntBASIC1.54□□□□□ -2.16
PRPF40AO75400 SNORD89-201ENST00000390981 114 ntBASIC1.54□□□□□ -2.16
PRPF40AO75400 RNU7-102P-201ENST00000458948 62 ntBASIC1.54□□□□□ -2.16
PRPF40AO75400 Y_RNA.697-201ENST00000516776 113 ntBASIC1.54□□□□□ -2.16
PRPF40AO75400 MALAT1.1-201ENST00000618249 95 ntBASIC1.54□□□□□ -2.16
PRPF40AO75400 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRPF40AO75400 Y_RNA.220-201ENST00000364244 109 ntBASIC1.53□□□□□ -2.16
PRPF40AO75400 Y_RNA.342-201ENST00000365352 113 ntBASIC1.53□□□□□ -2.16
PRPF40AO75400 RNU6-162P-201ENST00000516228 103 ntBASIC1.53□□□□□ -2.16
PRPF40AO75400 RNU7-10P-201ENST00000607194 63 ntBASIC1.53□□□□□ -2.16
PRPF40AO75400 AC103810.7-201ENST00000607821 91 ntBASIC1.53□□□□□ -2.16
PRPF40AO75400 AL157834.3-201ENST00000615543 103 ntBASIC1.53□□□□□ -2.16
PRPF40AO75400 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PRPF40AO75400 Y_RNA.57-201ENST00000362806 113 ntBASIC1.52□□□□□ -2.17
PRPF40AO75400 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
PRPF40AO75400 SNORD124-201ENST00000459577 104 ntBASIC1.52□□□□□ -2.17
PRPF40AO75400 RNA5SP404-201ENST00000517118 132 ntBASIC1.52□□□□□ -2.17
PRPF40AO75400 MIR548H5-201ENST00000580314 60 ntBASIC1.52□□□□□ -2.17
PRPF40AO75400 U7.3-201ENST00000616123 62 ntBASIC1.52□□□□□ -2.17
PRPF40AO75400 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.52□□□□□ -2.17
PRPF40AO75400 RNU6-1131P-201ENST00000364955 107 ntBASIC1.51□□□□□ -2.17
PRPF40AO75400 RNU6-1110P-201ENST00000516462 101 ntBASIC1.51□□□□□ -2.17
PRPF40AO75400 MIR4421-201ENST00000578133 69 ntBASIC1.51□□□□□ -2.17
PRPF40AO75400 AL359821.1-201ENST00000605519 182 ntBASIC1.51□□□□□ -2.17
PRPF40AO75400 Y_RNA.164-201ENST00000363709 102 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 MIR150-201ENST00000385048 84 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 SNORD100-201ENST00000408573 76 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 RNU7-56P-201ENST00000458744 62 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 U7.7-201ENST00000459276 60 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 MIR5582-201ENST00000579697 68 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.5□□□□□ -2.17
PRPF40AO75400 RMST_2.1-201ENST00000617263 136 ntBASIC1.5□□□□□ -2.17
PRPF40AO75400 Y_RNA.4-201ENST00000362333 112 ntBASIC1.49□□□□□ -2.17
PRPF40AO75400 SNORD114-24-201ENST00000365029 72 ntBASIC1.49□□□□□ -2.17
PRPF40AO75400 MIR488-201ENST00000365739 83 ntBASIC1.49□□□□□ -2.17
PRPF40AO75400 MIR181B2-201ENST00000385004 89 ntBASIC1.49□□□□□ -2.17
PRPF40AO75400 MIR520H-201ENST00000385126 88 ntBASIC1.49□□□□□ -2.17
PRPF40AO75400 RNU6-321P-201ENST00000410912 106 ntBASIC1.49□□□□□ -2.17
PRPF40AO75400 AP003327.1-201ENST00000529684 127 ntBASIC1.49□□□□□ -2.17
PRPF40AO75400 Y_RNA.43-201ENST00000362670 111 ntBASIC1.48□□□□□ -2.17
PRPF40AO75400 Y_RNA.56-201ENST00000362798 112 ntBASIC1.48□□□□□ -2.17
PRPF40AO75400 RNU1-124P-201ENST00000363861 145 ntBASIC1.48□□□□□ -2.17
PRPF40AO75400 MIR635-201ENST00000384830 98 ntBASIC1.48□□□□□ -2.17
PRPF40AO75400 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
PRPF40AO75400 TRMT112P2-201ENST00000512910 132 ntBASIC1.48□□□□□ -2.17
PRPF40AO75400 AC008608.1-201ENST00000603910 127 ntBASIC1.48□□□□□ -2.17
PRPF40AO75400 SNORD116-10-201ENST00000363791 102 ntBASIC1.47□□□□□ -2.17
PRPF40AO75400 Y_RNA.290-201ENST00000364879 114 ntBASIC1.47□□□□□ -2.17
PRPF40AO75400 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
PRPF40AO75400 RNU6-1255P-201ENST00000363434 112 ntBASIC1.46□□□□□ -2.18
PRPF40AO75400 Y_RNA.536-201ENST00000384621 113 ntBASIC1.46□□□□□ -2.18
PRPF40AO75400 RNU6-535P-201ENST00000384722 107 ntBASIC1.46□□□□□ -2.18
PRPF40AO75400 SNORD105-201ENST00000386910 85 ntBASIC1.46□□□□□ -2.18
PRPF40AO75400 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
PRPF40AO75400 Y_RNA.369-201ENST00000365568 117 ntBASIC1.45□□□□□ -2.18
PRPF40AO75400 Y_RNA.676-201ENST00000516393 96 ntBASIC1.45□□□□□ -2.18
PRPF40AO75400 RNU6-448P-201ENST00000517052 107 ntBASIC1.45□□□□□ -2.18
PRPF40AO75400 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
PRPF40AO75400 SNORD58A-201ENST00000383875 65 ntBASIC1.44□□□□□ -2.18
PRPF40AO75400 SNORD63B-201ENST00000411005 70 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms