Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 U6.70-201ENST00000620287 104 ntBASIC0.95□□□□□ -2.26
LMX1BO60663 AL512310.12-203ENST00000640543 90 ntBASIC0.95□□□□□ -2.26
LMX1BO60663 Y_RNA.36-201ENST00000362602 112 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 Y_RNA.98-201ENST00000363109 102 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 RNU6-934P-201ENST00000365154 107 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 RNU6-32P-201ENST00000383948 107 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 RNU6-13P-201ENST00000384248 107 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 RNU6-12P-201ENST00000384604 107 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 RNU6-41P-201ENST00000384741 107 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 Y_RNA.601-201ENST00000410500 113 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 RNU7-185P-201ENST00000459215 60 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 MIR4777-201ENST00000583710 86 ntBASIC0.94□□□□□ -2.26
LMX1BO60663 RNU6-1163P-201ENST00000364516 107 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
LMX1BO60663 RPS26P5-201ENST00000418544 335 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.93□□□□□ -2.26
LMX1BO60663 RNU6-795P-201ENST00000516323 103 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 SNORA25.16-201ENST00000516741 121 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 MIR8066-201ENST00000617280 78 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 Y_RNA.818-201ENST00000618813 71 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 PVT1_3.1-201ENST00000620853 95 ntBASIC0.93□□□□□ -2.26
LMX1BO60663 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
LMX1BO60663 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
LMX1BO60663 HSBP1P2-201ENST00000299671 229 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 RNU6-170P-201ENST00000362832 104 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 RNA5SP133-201ENST00000363368 119 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 RNU6-865P-201ENST00000364772 107 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 RNU6-1113P-201ENST00000384348 107 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 MIR19B1-201ENST00000384829 87 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 SCARNA23-201ENST00000516060 130 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 RNU6-158P-201ENST00000517104 100 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 AC019288.1-201ENST00000557918 224 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 AP001362.1-201ENST00000625165 124 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.92□□□□□ -2.26
LMX1BO60663 U6.109-201ENST00000636749 87 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
LMX1BO60663 AC023934.1-201ENST00000574529 2389 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 Y_RNA.119-201ENST00000363301 96 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 Y_RNA.173-201ENST00000363776 113 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 SNORD38.1-201ENST00000363863 68 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 MIR125B2-201ENST00000385128 89 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 SNORD93-201ENST00000408813 74 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 MTATP8P2-201ENST00000435212 202 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 AC133485.1-201ENST00000567176 124 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 MIR4771-2-201ENST00000577758 74 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 MIR4771-1-201ENST00000582617 74 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 MIR4676-201ENST00000583078 72 ntBASIC0.91□□□□□ -2.26
LMX1BO60663 Y_RNA.95-201ENST00000363079 95 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 RNU4-36P-201ENST00000364294 144 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 MIR488-201ENST00000365739 83 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 Y_RNA.544-201ENST00000384650 113 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 AC109327.2-201ENST00000448339 378 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 OR2A41P-201ENST00000473586 105 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 RNU6-531P-201ENST00000516694 104 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 MIR6779-201ENST00000617283 64 ntBASIC0.9□□□□□ -2.27
LMX1BO60663 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.9□□□□□ -2.27
LMX1BO60663 Y_RNA.42-201ENST00000362660 108 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 Y_RNA.93-201ENST00000363066 109 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
LMX1BO60663 Y_RNA.467-201ENST00000384297 102 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 MIR548G-201ENST00000408442 89 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 MIR1257-201ENST00000408490 117 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 SNRPGP12-201ENST00000449481 213 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 RNU7-56P-201ENST00000458744 62 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 Y_RNA.677-201ENST00000516401 85 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 RNA5SP404-201ENST00000517118 132 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 MIR4804-201ENST00000581683 73 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 SNORD92-201ENST00000585078 85 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 AC008608.1-201ENST00000603910 127 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 MIR6082-201ENST00000613604 109 ntBASIC0.89□□□□□ -2.27
LMX1BO60663 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
LMX1BO60663 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
LMX1BO60663 Y_RNA.13-201ENST00000362403 112 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 RNU1-124P-201ENST00000363861 145 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 RNU6-644P-201ENST00000391155 98 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 MIR1827-201ENST00000408549 66 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 RNU4-83P-201ENST00000410863 133 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 SNORD124-201ENST00000459577 104 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 MIR4500-201ENST00000579472 76 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.88□□□□□ -2.27
LMX1BO60663 Y_RNA.10-201ENST00000362371 110 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 RNU6-403P-201ENST00000363163 104 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.87□□□□□ -2.27
LMX1BO60663 Y_RNA.659-201ENST00000515994 113 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 RNU7-156P-201ENST00000517214 74 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 RNU6-90P-201ENST00000606352 106 ntBASIC0.87□□□□□ -2.27
LMX1BO60663 Y_RNA.107-201ENST00000363190 121 ntBASIC0.86□□□□□ -2.27
LMX1BO60663 RNU6-1244P-201ENST00000363614 108 ntBASIC0.86□□□□□ -2.27
LMX1BO60663 SNORD45B-201ENST00000364617 72 ntBASIC0.86□□□□□ -2.27
LMX1BO60663 Y_RNA.342-201ENST00000365352 113 ntBASIC0.86□□□□□ -2.27
LMX1BO60663 BX276092.1-201ENST00000427368 251 ntBASIC0.86□□□□□ -2.27
LMX1BO60663 RNU7-61P-201ENST00000515897 61 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms