Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC025627.3-201ENST00000582078 182 ntBASIC1.13□□□□□ -2.23
KDM1AO60341 AC008608.1-201ENST00000603910 127 ntBASIC1.13□□□□□ -2.23
KDM1AO60341 AC096720.1-201ENST00000604441 183 ntBASIC1.13□□□□□ -2.23
KDM1AO60341 Y_RNA.10-201ENST00000362371 110 ntBASIC1.12□□□□□ -2.23
KDM1AO60341 Y_RNA.247-201ENST00000364500 92 ntBASIC1.12□□□□□ -2.23
KDM1AO60341 RNU6-1335P-201ENST00000365426 107 ntBASIC1.12□□□□□ -2.23
KDM1AO60341 SNORA51.5-201ENST00000384126 131 ntBASIC1.12□□□□□ -2.23
KDM1AO60341 RNU6-321P-201ENST00000410912 106 ntBASIC1.12□□□□□ -2.23
KDM1AO60341 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
KDM1AO60341 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
KDM1AO60341 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.12□□□□□ -2.23
KDM1AO60341 RNU6-766P-201ENST00000362478 107 ntBASIC1.11□□□□□ -2.23
KDM1AO60341 RNU6-756P-201ENST00000383997 107 ntBASIC1.11□□□□□ -2.23
KDM1AO60341 RNU6-1113P-201ENST00000384348 107 ntBASIC1.11□□□□□ -2.23
KDM1AO60341 SNORA19.1-201ENST00000410656 129 ntBASIC1.11□□□□□ -2.23
KDM1AO60341 SNRPGP12-201ENST00000449481 213 ntBASIC1.11□□□□□ -2.23
KDM1AO60341 RNU6-904P-201ENST00000516206 101 ntBASIC1.11□□□□□ -2.23
KDM1AO60341 AC013244.2-201ENST00000603396 103 ntBASIC1.11□□□□□ -2.23
KDM1AO60341 Y_RNA.697-201ENST00000516776 113 ntBASIC1.1□□□□□ -2.23
KDM1AO60341 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
KDM1AO60341 MIR101-2-201ENST00000362195 79 ntBASIC1.09□□□□□ -2.23
KDM1AO60341 MIR450A1-201ENST00000362262 91 ntBASIC1.09□□□□□ -2.23
KDM1AO60341 MIR548G-201ENST00000408442 89 ntBASIC1.09□□□□□ -2.23
KDM1AO60341 Y_RNA.659-201ENST00000515994 113 ntBASIC1.09□□□□□ -2.23
KDM1AO60341 RNU6-448P-201ENST00000517052 107 ntBASIC1.09□□□□□ -2.23
KDM1AO60341 MTND5P40-201ENST00000559945 246 ntBASIC1.09□□□□□ -2.23
KDM1AO60341 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.09□□□□□ -2.23
KDM1AO60341 SNORD45B-201ENST00000364617 72 ntBASIC1.08□□□□□ -2.24
KDM1AO60341 RNU6-571P-201ENST00000384128 107 ntBASIC1.08□□□□□ -2.24
KDM1AO60341 Y_RNA.601-201ENST00000410500 113 ntBASIC1.08□□□□□ -2.24
KDM1AO60341 BX276092.1-201ENST00000427368 251 ntBASIC1.08□□□□□ -2.24
KDM1AO60341 SPINT5P-201ENST00000448174 155 ntBASIC1.08□□□□□ -2.24
KDM1AO60341 MIR3613-201ENST00000579844 87 ntBASIC1.08□□□□□ -2.24
KDM1AO60341 MIR573-201ENST00000384964 99 ntBASIC1.07□□□□□ -2.24
KDM1AO60341 MIR590-201ENST00000385008 97 ntBASIC1.07□□□□□ -2.24
KDM1AO60341 AC004941.2-201ENST00000427009 228 ntBASIC1.07□□□□□ -2.24
KDM1AO60341 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.07□□□□□ -2.24
KDM1AO60341 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.07□□□□□ -2.24
KDM1AO60341 RNU6-90P-201ENST00000606352 106 ntBASIC1.07□□□□□ -2.24
KDM1AO60341 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KDM1AO60341 Y_RNA.536-201ENST00000384621 113 ntBASIC1.06□□□□□ -2.24
KDM1AO60341 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
KDM1AO60341 SNORD100-201ENST00000408573 76 ntBASIC1.06□□□□□ -2.24
KDM1AO60341 RNU6-537P-201ENST00000517277 103 ntBASIC1.06□□□□□ -2.24
KDM1AO60341 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
KDM1AO60341 Y_RNA.818-201ENST00000618813 71 ntBASIC1.06□□□□□ -2.24
KDM1AO60341 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
KDM1AO60341 Y_RNA.56-201ENST00000362798 112 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 RNU6-153P-201ENST00000364422 104 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 RNU6-147P-201ENST00000383983 107 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 SNORD99-201ENST00000408612 74 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 SCARNA23-201ENST00000516060 130 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 MIR548H5-201ENST00000580314 60 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 MIR4439-201ENST00000583746 80 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 RNU7-10P-201ENST00000607194 63 ntBASIC1.05□□□□□ -2.24
KDM1AO60341 Y_RNA.173-201ENST00000363776 113 ntBASIC1.04□□□□□ -2.24
KDM1AO60341 Y_RNA.544-201ENST00000384650 113 ntBASIC1.04□□□□□ -2.24
KDM1AO60341 RNU6-535P-201ENST00000384722 107 ntBASIC1.04□□□□□ -2.24
KDM1AO60341 RNU6-850P-201ENST00000516934 103 ntBASIC1.04□□□□□ -2.24
KDM1AO60341 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.04□□□□□ -2.24
KDM1AO60341 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KDM1AO60341 Y_RNA.95-201ENST00000363079 95 ntBASIC1.03□□□□□ -2.24
KDM1AO60341 AC002350.1-201ENST00000490759 375 ntBASIC1.03□□□□□ -2.24
KDM1AO60341 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
KDM1AO60341 AC091304.10-201ENST00000641554 121 ntBASIC1.03□□□□□ -2.24
KDM1AO60341 RNU6-170P-201ENST00000362832 104 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 Y_RNA.174-201ENST00000363781 105 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 RNU6-32P-201ENST00000383948 107 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 RNU6-13P-201ENST00000384248 107 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 RNU6-12P-201ENST00000384604 107 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 Y_RNA.567-201ENST00000384736 106 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 RNU6-41P-201ENST00000384741 107 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
KDM1AO60341 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KDM1AO60341 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 Y_RNA.107-201ENST00000363190 121 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 RNU6-1163P-201ENST00000364516 107 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 AC244098.3-201ENST00000424803 96 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 AC109327.2-201ENST00000448339 378 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 RNU6-795P-201ENST00000516323 103 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 AC011195.1-201ENST00000578177 177 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 MIR3612-201ENST00000579753 87 ntBASIC1.01□□□□□ -2.25
KDM1AO60341 RNU6-1244P-201ENST00000363614 108 ntBASIC1□□□□□ -2.25
KDM1AO60341 RNA5SP117-201ENST00000365294 118 ntBASIC1□□□□□ -2.25
KDM1AO60341 MIR635-201ENST00000384830 98 ntBASIC1□□□□□ -2.25
KDM1AO60341 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
KDM1AO60341 RNU6-109P-201ENST00000516364 107 ntBASIC1□□□□□ -2.25
KDM1AO60341 RNU6-184P-201ENST00000516514 107 ntBASIC1□□□□□ -2.25
KDM1AO60341 AC012531.4-201ENST00000616509 177 ntBASIC1□□□□□ -2.25
KDM1AO60341 uc_338.16-201ENST00000621804 95 ntBASIC1□□□□□ -2.25
KDM1AO60341 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1□□□□□ -2.25
KDM1AO60341 Y_RNA.342-201ENST00000365352 113 ntBASIC0.99□□□□□ -2.25
KDM1AO60341 AC092628.1-201ENST00000436250 252 ntBASIC0.99□□□□□ -2.25
KDM1AO60341 SNORA31.14-201ENST00000516728 116 ntBASIC0.99□□□□□ -2.25
KDM1AO60341 RNU6-158P-201ENST00000517104 100 ntBASIC0.99□□□□□ -2.25
KDM1AO60341 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
KDM1AO60341 Y_RNA.57-201ENST00000362806 113 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 Y_RNA.93-201ENST00000363066 109 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 Y_RNA.466-201ENST00000384294 113 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms