Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
RRP9O43818 MIR4500-201ENST00000579472 76 ntBASIC0.87□□□□□ -2.27
RRP9O43818 U8.6-201ENST00000364939 135 ntBASIC0.86□□□□□ -2.27
RRP9O43818 Y_RNA.536-201ENST00000384621 113 ntBASIC0.86□□□□□ -2.27
RRP9O43818 AL353813.1-201ENST00000440700 253 ntBASIC0.86□□□□□ -2.27
RRP9O43818 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
RRP9O43818 MIR5009-201ENST00000578736 100 ntBASIC0.86□□□□□ -2.27
RRP9O43818 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
RRP9O43818 RNU6-1107P-201ENST00000364817 104 ntBASIC0.85□□□□□ -2.27
RRP9O43818 RNU6-535P-201ENST00000384722 107 ntBASIC0.85□□□□□ -2.27
RRP9O43818 MIR3612-201ENST00000579753 87 ntBASIC0.85□□□□□ -2.27
RRP9O43818 RNU6-1290P-201ENST00000362957 109 ntBASIC0.84□□□□□ -2.27
RRP9O43818 Y_RNA.323-201ENST00000365157 109 ntBASIC0.84□□□□□ -2.27
RRP9O43818 RNA5SP117-201ENST00000365294 118 ntBASIC0.84□□□□□ -2.27
RRP9O43818 RNU6-1201P-201ENST00000384227 107 ntBASIC0.84□□□□□ -2.27
RRP9O43818 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.84□□□□□ -2.27
RRP9O43818 AC004941.2-201ENST00000427009 228 ntBASIC0.84□□□□□ -2.27
RRP9O43818 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.84□□□□□ -2.27
RRP9O43818 Y_RNA.174-201ENST00000363781 105 ntBASIC0.83□□□□□ -2.28
RRP9O43818 SNORD38.1-201ENST00000363863 68 ntBASIC0.83□□□□□ -2.28
RRP9O43818 RNU4-45P-201ENST00000365469 141 ntBASIC0.83□□□□□ -2.28
RRP9O43818 RNU6-291P-201ENST00000384720 107 ntBASIC0.83□□□□□ -2.28
RRP9O43818 RNU6-589P-201ENST00000516485 107 ntBASIC0.83□□□□□ -2.28
RRP9O43818 MIR4694-201ENST00000578534 80 ntBASIC0.83□□□□□ -2.28
RRP9O43818 MIR548H5-201ENST00000580314 60 ntBASIC0.83□□□□□ -2.28
RRP9O43818 RNU7-10P-201ENST00000607194 63 ntBASIC0.83□□□□□ -2.28
RRP9O43818 AL442128.1-201ENST00000615151 90 ntBASIC0.83□□□□□ -2.28
RRP9O43818 Y_RNA.4-201ENST00000362333 112 ntBASIC0.82□□□□□ -2.28
RRP9O43818 Y_RNA.56-201ENST00000362798 112 ntBASIC0.82□□□□□ -2.28
RRP9O43818 Y_RNA.377-201ENST00000365644 108 ntBASIC0.82□□□□□ -2.28
RRP9O43818 RNA5SP222-201ENST00000411039 105 ntBASIC0.82□□□□□ -2.28
RRP9O43818 RNU6-1006P-201ENST00000516998 103 ntBASIC0.82□□□□□ -2.28
RRP9O43818 RNY3P2-201ENST00000362918 102 ntBASIC0.81□□□□□ -2.28
RRP9O43818 RNU6-1014P-201ENST00000383940 103 ntBASIC0.81□□□□□ -2.28
RRP9O43818 MIR577-201ENST00000385196 96 ntBASIC0.81□□□□□ -2.28
RRP9O43818 BX276092.1-201ENST00000427368 251 ntBASIC0.81□□□□□ -2.28
RRP9O43818 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.81□□□□□ -2.28
RRP9O43818 Y_RNA.676-201ENST00000516393 96 ntBASIC0.81□□□□□ -2.28
RRP9O43818 MTND5P40-201ENST00000559945 246 ntBASIC0.81□□□□□ -2.28
RRP9O43818 AC096720.1-201ENST00000604441 183 ntBASIC0.81□□□□□ -2.28
RRP9O43818 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RRP9O43818 MIR18A-201ENST00000362310 71 ntBASIC0.8□□□□□ -2.28
RRP9O43818 Y_RNA.32-201ENST00000362589 110 ntBASIC0.8□□□□□ -2.28
RRP9O43818 Y_RNA.164-201ENST00000363709 102 ntBASIC0.8□□□□□ -2.28
RRP9O43818 RNU6-1325P-201ENST00000364905 105 ntBASIC0.8□□□□□ -2.28
RRP9O43818 RNU6-571P-201ENST00000384128 107 ntBASIC0.8□□□□□ -2.28
RRP9O43818 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
RRP9O43818 SNRPGP12-201ENST00000449481 213 ntBASIC0.8□□□□□ -2.28
RRP9O43818 RNU6-469P-201ENST00000516253 101 ntBASIC0.8□□□□□ -2.28
RRP9O43818 Y_RNA.709-201ENST00000516952 92 ntBASIC0.8□□□□□ -2.28
RRP9O43818 uc_338.16-201ENST00000621804 95 ntBASIC0.8□□□□□ -2.28
RRP9O43818 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.8□□□□□ -2.28
RRP9O43818 RNU6-832P-201ENST00000363319 107 ntBASIC0.79□□□□□ -2.28
RRP9O43818 SNORA25.9-201ENST00000365087 128 ntBASIC0.79□□□□□ -2.28
RRP9O43818 SPINT5P-201ENST00000448174 155 ntBASIC0.79□□□□□ -2.28
RRP9O43818 SNORA31.14-201ENST00000516728 116 ntBASIC0.79□□□□□ -2.28
RRP9O43818 Y_RNA.247-201ENST00000364500 92 ntBASIC0.78□□□□□ -2.28
RRP9O43818 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
RRP9O43818 MIR548G-201ENST00000408442 89 ntBASIC0.78□□□□□ -2.28
RRP9O43818 RNU6-135P-201ENST00000516769 101 ntBASIC0.78□□□□□ -2.28
RRP9O43818 AC141557.1-201ENST00000540982 400 ntBASIC0.78□□□□□ -2.28
RRP9O43818 RNU6-90P-201ENST00000606352 106 ntBASIC0.78□□□□□ -2.28
RRP9O43818 RNU6-170P-201ENST00000362832 104 ntBASIC0.77□□□□□ -2.29
RRP9O43818 RNU6-1099P-201ENST00000363533 107 ntBASIC0.77□□□□□ -2.29
RRP9O43818 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
RRP9O43818 MIR635-201ENST00000384830 98 ntBASIC0.77□□□□□ -2.29
RRP9O43818 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.77□□□□□ -2.29
RRP9O43818 RNA5SP102-201ENST00000516865 106 ntBASIC0.77□□□□□ -2.29
RRP9O43818 RNU6-850P-201ENST00000516934 103 ntBASIC0.77□□□□□ -2.29
RRP9O43818 AC138907.6-201ENST00000568401 126 ntBASIC0.77□□□□□ -2.29
RRP9O43818 AC138869.1-201ENST00000568623 124 ntBASIC0.77□□□□□ -2.29
RRP9O43818 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
RRP9O43818 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.77□□□□□ -2.29
RRP9O43818 Y_RNA.163-201ENST00000363702 113 ntBASIC0.76□□□□□ -2.29
RRP9O43818 RNU4-36P-201ENST00000364294 144 ntBASIC0.76□□□□□ -2.29
RRP9O43818 MIR1302-5-201ENST00000408164 150 ntBASIC0.76□□□□□ -2.29
RRP9O43818 AC092628.1-201ENST00000436250 252 ntBASIC0.76□□□□□ -2.29
RRP9O43818 Y_RNA.10-201ENST00000362371 110 ntBASIC0.75□□□□□ -2.29
RRP9O43818 RNU6-215P-201ENST00000365169 102 ntBASIC0.75□□□□□ -2.29
RRP9O43818 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.75□□□□□ -2.29
RRP9O43818 MIR8070-201ENST00000616510 88 ntBASIC0.75□□□□□ -2.29
RRP9O43818 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.75□□□□□ -2.29
RRP9O43818 RNA5SP245-201ENST00000364239 121 ntBASIC0.74□□□□□ -2.29
RRP9O43818 Y_RNA.342-201ENST00000365352 113 ntBASIC0.74□□□□□ -2.29
RRP9O43818 SNORD20-201ENST00000384550 80 ntBASIC0.74□□□□□ -2.29
RRP9O43818 MIR532-201ENST00000385025 91 ntBASIC0.74□□□□□ -2.29
RRP9O43818 MIR644A-201ENST00000385262 94 ntBASIC0.74□□□□□ -2.29
RRP9O43818 MIR140-201ENST00000385282 100 ntBASIC0.74□□□□□ -2.29
RRP9O43818 RNY4P18-201ENST00000391107 89 ntBASIC0.74□□□□□ -2.29
RRP9O43818 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.74□□□□□ -2.29
RRP9O43818 TRAJ51-201ENST00000504127 63 ntBASIC0.74□□□□□ -2.29
RRP9O43818 Y_RNA.659-201ENST00000515994 113 ntBASIC0.74□□□□□ -2.29
RRP9O43818 MIR3678-201ENST00000578455 94 ntBASIC0.74□□□□□ -2.29
RRP9O43818 Y_RNA.78-201ENST00000362970 110 ntBASIC0.73□□□□□ -2.29
RRP9O43818 Y_RNA.191-201ENST00000363972 113 ntBASIC0.73□□□□□ -2.29
RRP9O43818 SNORD45B-201ENST00000364617 72 ntBASIC0.73□□□□□ -2.29
RRP9O43818 RNU6-106P-201ENST00000384405 107 ntBASIC0.73□□□□□ -2.29
RRP9O43818 RNU6-554P-201ENST00000410466 106 ntBASIC0.73□□□□□ -2.29
RRP9O43818 SNORD63B-201ENST00000411005 70 ntBASIC0.73□□□□□ -2.29
RRP9O43818 AC097635.1-201ENST00000450678 155 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms