Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RNU6-448P-201ENST00000517052 107 ntBASIC1.24□□□□□ -2.21
KLF4O43474 RNU6-90P-201ENST00000606352 106 ntBASIC1.24□□□□□ -2.21
KLF4O43474 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
KLF4O43474 MIR577-201ENST00000385196 96 ntBASIC1.23□□□□□ -2.21
KLF4O43474 SPINT5P-201ENST00000448174 155 ntBASIC1.23□□□□□ -2.21
KLF4O43474 AC013244.2-201ENST00000603396 103 ntBASIC1.23□□□□□ -2.21
KLF4O43474 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.23□□□□□ -2.21
KLF4O43474 RNU6-1099P-201ENST00000363533 107 ntBASIC1.22□□□□□ -2.21
KLF4O43474 SNORD45B-201ENST00000364617 72 ntBASIC1.22□□□□□ -2.21
KLF4O43474 Y_RNA.659-201ENST00000515994 113 ntBASIC1.22□□□□□ -2.21
KLF4O43474 MIR548H5-201ENST00000580314 60 ntBASIC1.22□□□□□ -2.21
KLF4O43474 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
KLF4O43474 HSBP1P2-201ENST00000299671 229 ntBASIC1.21□□□□□ -2.22
KLF4O43474 RNU6-755P-201ENST00000364400 103 ntBASIC1.21□□□□□ -2.22
KLF4O43474 RNA5SP117-201ENST00000365294 118 ntBASIC1.21□□□□□ -2.22
KLF4O43474 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KLF4O43474 SNORA51.5-201ENST00000384126 131 ntBASIC1.21□□□□□ -2.22
KLF4O43474 RNU6-106P-201ENST00000384405 107 ntBASIC1.21□□□□□ -2.22
KLF4O43474 MIR499A-201ENST00000384903 122 ntBASIC1.21□□□□□ -2.22
KLF4O43474 Y_RNA.601-201ENST00000410500 113 ntBASIC1.21□□□□□ -2.22
KLF4O43474 AL353813.1-201ENST00000440700 253 ntBASIC1.21□□□□□ -2.22
KLF4O43474 uc_338.28-201ENST00000612082 187 ntBASIC1.21□□□□□ -2.22
KLF4O43474 Y_RNA.56-201ENST00000362798 112 ntBASIC1.2□□□□□ -2.22
KLF4O43474 SNORA25.9-201ENST00000365087 128 ntBASIC1.2□□□□□ -2.22
KLF4O43474 RNU6-756P-201ENST00000383997 107 ntBASIC1.2□□□□□ -2.22
KLF4O43474 RNU6-44P-201ENST00000384045 107 ntBASIC1.2□□□□□ -2.22
KLF4O43474 RNU6-571P-201ENST00000384128 107 ntBASIC1.2□□□□□ -2.22
KLF4O43474 MIR548G-201ENST00000408442 89 ntBASIC1.2□□□□□ -2.22
KLF4O43474 RNU6-554P-201ENST00000410466 106 ntBASIC1.2□□□□□ -2.22
KLF4O43474 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.2□□□□□ -2.22
KLF4O43474 Y_RNA.536-201ENST00000384621 113 ntBASIC1.19□□□□□ -2.22
KLF4O43474 RNU1-123P-201ENST00000458950 160 ntBASIC1.19□□□□□ -2.22
KLF4O43474 AC008608.1-201ENST00000603910 127 ntBASIC1.19□□□□□ -2.22
KLF4O43474 Y_RNA.174-201ENST00000363781 105 ntBASIC1.18□□□□□ -2.22
KLF4O43474 RNU6-535P-201ENST00000384722 107 ntBASIC1.18□□□□□ -2.22
KLF4O43474 MIR635-201ENST00000384830 98 ntBASIC1.18□□□□□ -2.22
KLF4O43474 SNORD99-201ENST00000408612 74 ntBASIC1.18□□□□□ -2.22
KLF4O43474 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
KLF4O43474 RNU6-1006P-201ENST00000516998 103 ntBASIC1.18□□□□□ -2.22
KLF4O43474 MIR4439-201ENST00000583746 80 ntBASIC1.18□□□□□ -2.22
KLF4O43474 RNU6-766P-201ENST00000362478 107 ntBASIC1.17□□□□□ -2.22
KLF4O43474 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.17□□□□□ -2.22
KLF4O43474 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
KLF4O43474 MIR3660-201ENST00000584845 100 ntBASIC1.17□□□□□ -2.22
KLF4O43474 Y_RNA.96-201ENST00000363092 109 ntBASIC1.16□□□□□ -2.22
KLF4O43474 RNU4-45P-201ENST00000365469 141 ntBASIC1.16□□□□□ -2.22
KLF4O43474 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
KLF4O43474 SNORD100-201ENST00000408573 76 ntBASIC1.16□□□□□ -2.22
KLF4O43474 MIR1276-201ENST00000408707 83 ntBASIC1.16□□□□□ -2.22
KLF4O43474 BX276092.1-201ENST00000427368 251 ntBASIC1.16□□□□□ -2.22
KLF4O43474 SNORA63.4-201ENST00000362763 126 ntBASIC1.15□□□□□ -2.23
KLF4O43474 Y_RNA.81-201ENST00000362997 102 ntBASIC1.15□□□□□ -2.23
KLF4O43474 Y_RNA.544-201ENST00000384650 113 ntBASIC1.15□□□□□ -2.23
KLF4O43474 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
KLF4O43474 SCARNA23-201ENST00000516060 130 ntBASIC1.15□□□□□ -2.23
KLF4O43474 RNU6-904P-201ENST00000516206 101 ntBASIC1.15□□□□□ -2.23
KLF4O43474 RNU6-469P-201ENST00000516253 101 ntBASIC1.15□□□□□ -2.23
KLF4O43474 AC011195.1-201ENST00000578177 177 ntBASIC1.15□□□□□ -2.23
KLF4O43474 RNU6-1335P-201ENST00000365426 107 ntBASIC1.14□□□□□ -2.23
KLF4O43474 Y_RNA.567-201ENST00000384736 106 ntBASIC1.14□□□□□ -2.23
KLF4O43474 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
KLF4O43474 SNRPGP12-201ENST00000449481 213 ntBASIC1.14□□□□□ -2.23
KLF4O43474 AC002350.1-201ENST00000490759 375 ntBASIC1.14□□□□□ -2.23
KLF4O43474 AC138907.6-201ENST00000568401 126 ntBASIC1.14□□□□□ -2.23
KLF4O43474 AC138869.1-201ENST00000568623 124 ntBASIC1.14□□□□□ -2.23
KLF4O43474 AL353765.1-201ENST00000605514 183 ntBASIC1.14□□□□□ -2.23
KLF4O43474 Y_RNA.818-201ENST00000618813 71 ntBASIC1.14□□□□□ -2.23
KLF4O43474 MIR7111-201ENST00000619751 72 ntBASIC1.14□□□□□ -2.23
KLF4O43474 RNU6-1125P-201ENST00000363601 107 ntBASIC1.13□□□□□ -2.23
KLF4O43474 RNU6-480P-201ENST00000384332 107 ntBASIC1.13□□□□□ -2.23
KLF4O43474 Y_RNA.508-201ENST00000384502 114 ntBASIC1.13□□□□□ -2.23
KLF4O43474 RNU6-135P-201ENST00000516769 101 ntBASIC1.13□□□□□ -2.23
KLF4O43474 RNU6-850P-201ENST00000516934 103 ntBASIC1.13□□□□□ -2.23
KLF4O43474 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.13□□□□□ -2.23
KLF4O43474 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
KLF4O43474 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
KLF4O43474 RNU6-170P-201ENST00000362832 104 ntBASIC1.12□□□□□ -2.23
KLF4O43474 Y_RNA.247-201ENST00000364500 92 ntBASIC1.12□□□□□ -2.23
KLF4O43474 Y_RNA.342-201ENST00000365352 113 ntBASIC1.12□□□□□ -2.23
KLF4O43474 RNU6-291P-201ENST00000384720 107 ntBASIC1.12□□□□□ -2.23
KLF4O43474 MIR608-201ENST00000384820 100 ntBASIC1.11□□□□□ -2.23
KLF4O43474 RNA5SP102-201ENST00000516865 106 ntBASIC1.11□□□□□ -2.23
KLF4O43474 MIR3612-201ENST00000579753 87 ntBASIC1.11□□□□□ -2.23
KLF4O43474 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
KLF4O43474 MIR450A1-201ENST00000362262 91 ntBASIC1.1□□□□□ -2.23
KLF4O43474 Y_RNA.95-201ENST00000363079 95 ntBASIC1.1□□□□□ -2.23
KLF4O43474 Y_RNA.173-201ENST00000363776 113 ntBASIC1.1□□□□□ -2.23
KLF4O43474 Y_RNA.355-201ENST00000365462 98 ntBASIC1.1□□□□□ -2.23
KLF4O43474 MIR590-201ENST00000385008 97 ntBASIC1.1□□□□□ -2.23
KLF4O43474 MIR518E-201ENST00000385252 88 ntBASIC1.1□□□□□ -2.23
KLF4O43474 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
KLF4O43474 AC092628.1-201ENST00000436250 252 ntBASIC1.09□□□□□ -2.23
KLF4O43474 AC109327.2-201ENST00000448339 378 ntBASIC1.09□□□□□ -2.23
KLF4O43474 MIR2052-201ENST00000636055 55 ntBASIC1.09□□□□□ -2.23
KLF4O43474 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
KLF4O43474 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KLF4O43474 Y_RNA.57-201ENST00000362806 113 ntBASIC1.08□□□□□ -2.24
KLF4O43474 Y_RNA.93-201ENST00000363066 109 ntBASIC1.08□□□□□ -2.24
KLF4O43474 Y_RNA.118-201ENST00000363300 101 ntBASIC1.08□□□□□ -2.24
KLF4O43474 Y_RNA.224-201ENST00000364308 111 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms