Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SRGAP3O43295 RNU6-633P-201ENST00000362612 103 ntBASIC1.68□□□□□ -2.14
SRGAP3O43295 SNORA72.6-201ENST00000384520 129 ntBASIC1.68□□□□□ -2.14
SRGAP3O43295 SNORD93-201ENST00000408813 74 ntBASIC1.68□□□□□ -2.14
SRGAP3O43295 RNU6-519P-201ENST00000410590 108 ntBASIC1.68□□□□□ -2.14
SRGAP3O43295 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.68□□□□□ -2.14
SRGAP3O43295 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SRGAP3O43295 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SRGAP3O43295 SNORA7.1-201ENST00000363750 139 ntBASIC1.67□□□□□ -2.14
SRGAP3O43295 Y_RNA.330-201ENST00000365230 109 ntBASIC1.67□□□□□ -2.14
SRGAP3O43295 AL161932.1-201ENST00000437408 146 ntBASIC1.67□□□□□ -2.14
SRGAP3O43295 RNU1-123P-201ENST00000458950 160 ntBASIC1.67□□□□□ -2.14
SRGAP3O43295 RNU6-165P-201ENST00000517170 99 ntBASIC1.67□□□□□ -2.14
SRGAP3O43295 MIR3664-201ENST00000579074 99 ntBASIC1.67□□□□□ -2.14
SRGAP3O43295 RNU6-403P-201ENST00000363163 104 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 SNORD115-27-201ENST00000364430 82 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 RNU6-53P-201ENST00000365367 106 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 RNU6-571P-201ENST00000384128 107 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 RNU7-171P-201ENST00000459581 62 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 SNORA25.16-201ENST00000516741 121 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 AL512310.8-201ENST00000550183 120 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 snoU13.31-201ENST00000607291 104 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 AC006160.2-201ENST00000637708 154 ntBASIC1.66□□□□□ -2.14
SRGAP3O43295 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.65□□□□□ -2.15
SRGAP3O43295 AC004223.1-201ENST00000479840 271 ntBASIC1.65□□□□□ -2.15
SRGAP3O43295 RNU6-531P-201ENST00000516694 104 ntBASIC1.65□□□□□ -2.15
SRGAP3O43295 MIR4491-201ENST00000581087 68 ntBASIC1.65□□□□□ -2.15
SRGAP3O43295 RNU6-787P-201ENST00000384032 107 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SRGAP3O43295 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.64□□□□□ -2.15
SRGAP3O43295 MIR18B-201ENST00000454574 71 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 snoU13.21-201ENST00000459368 105 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 RN7SKP88-201ENST00000516847 250 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
SRGAP3O43295 7SK.8-201ENST00000612110 250 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.64□□□□□ -2.15
SRGAP3O43295 7SK.11-201ENST00000615477 250 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 7SK.13-201ENST00000622040 250 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 AC023934.1-201ENST00000574529 2389 ntBASIC1.64□□□□□ -2.15
SRGAP3O43295 RNU4-58P-201ENST00000363192 141 ntBASIC1.63□□□□□ -2.15
SRGAP3O43295 Y_RNA.313-201ENST00000365095 103 ntBASIC1.63□□□□□ -2.15
SRGAP3O43295 RNU1-36P-201ENST00000365130 165 ntBASIC1.63□□□□□ -2.15
SRGAP3O43295 MIR519C-201ENST00000385053 87 ntBASIC1.63□□□□□ -2.15
SRGAP3O43295 AC048334.1-201ENST00000477975 159 ntBASIC1.63□□□□□ -2.15
SRGAP3O43295 MIR3198-2-201ENST00000577868 80 ntBASIC1.63□□□□□ -2.15
SRGAP3O43295 MIR7974-201ENST00000615835 79 ntBASIC1.63□□□□□ -2.15
SRGAP3O43295 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.62□□□□□ -2.15
SRGAP3O43295 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SRGAP3O43295 RNU4-32P-201ENST00000363404 141 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 RNU6-580P-201ENST00000365159 107 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 MIR758-201ENST00000390227 88 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 MIR1257-201ENST00000408490 117 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 SNORD83.1-201ENST00000411362 77 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 AC068338.1-201ENST00000565567 176 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 MIR4666B-201ENST00000578142 81 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 MIR3660-201ENST00000584845 100 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 AC008163.1-202ENST00000636004 2889 ntBASIC1.62□□□□□ -2.15
SRGAP3O43295 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SRGAP3O43295 SNORD115-37-201ENST00000363768 82 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 RNU6-652P-201ENST00000365488 107 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 SNORA40.6-201ENST00000391153 128 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 Y_RNA.588-201ENST00000391254 102 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 Y_RNA.607-201ENST00000410597 98 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 AC087499.7-201ENST00000441958 109 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 SNORA31.2-201ENST00000516019 134 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 AL353770.2-201ENST00000620024 78 ntBASIC1.61□□□□□ -2.15
SRGAP3O43295 RNU6-524P-201ENST00000384270 107 ntBASIC1.6□□□□□ -2.15
SRGAP3O43295 MIR516A2-201ENST00000384888 90 ntBASIC1.6□□□□□ -2.15
SRGAP3O43295 MIR516A1-201ENST00000385033 90 ntBASIC1.6□□□□□ -2.15
SRGAP3O43295 AC015818.7-201ENST00000428754 109 ntBASIC1.6□□□□□ -2.15
SRGAP3O43295 RNU7-185P-201ENST00000459215 60 ntBASIC1.6□□□□□ -2.15
SRGAP3O43295 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.6□□□□□ -2.15
SRGAP3O43295 AL157834.3-201ENST00000615543 103 ntBASIC1.6□□□□□ -2.15
SRGAP3O43295 Y_RNA.226-201ENST00000364337 114 ntBASIC1.59□□□□□ -2.15
SRGAP3O43295 SNORA75.2-201ENST00000391138 150 ntBASIC1.59□□□□□ -2.15
SRGAP3O43295 SNORA75.3-201ENST00000391231 150 ntBASIC1.59□□□□□ -2.15
SRGAP3O43295 MIR101-2-201ENST00000362195 79 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 RNU6-321P-201ENST00000410912 106 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 SNORD4B-201ENST00000459083 72 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.58□□□□□ -2.16
SRGAP3O43295 AC023827.1-201ENST00000569247 97 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 MIR4771-2-201ENST00000577758 74 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 MIR4771-1-201ENST00000582617 74 ntBASIC1.58□□□□□ -2.16
SRGAP3O43295 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SRGAP3O43295 SNORD113.3-201ENST00000364630 78 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 RNU6-243P-201ENST00000391140 107 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 RNU6-1254P-201ENST00000391266 104 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 RNU7-85P-201ENST00000458851 63 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 snoU13.11-201ENST00000459219 104 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 Y_RNA.648-201ENST00000459455 110 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 AC093729.1-201ENST00000513074 128 ntBASIC1.57□□□□□ -2.16
SRGAP3O43295 AC013244.2-201ENST00000603396 103 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms