Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.98□□□□□ -2.57
LSM1O15116 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.98□□□□□ -2.57
LSM1O15116 SNORD115-44-201ENST00000365391 82 ntBASIC-0.98□□□□□ -2.57
LSM1O15116 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.98□□□□□ -2.57
LSM1O15116 RNU6-758P-201ENST00000516292 89 ntBASIC-0.98□□□□□ -2.57
LSM1O15116 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.98□□□□□ -2.57
LSM1O15116 SNORD114-14-201ENST00000362723 75 ntBASIC-0.99□□□□□ -2.57
LSM1O15116 RNU7-123P-201ENST00000515911 60 ntBASIC-0.99□□□□□ -2.57
LSM1O15116 RNU7-2P-201ENST00000516096 62 ntBASIC-0.99□□□□□ -2.57
LSM1O15116 AC134503.1-201ENST00000633048 54 ntBASIC-0.99□□□□□ -2.57
LSM1O15116 MIR224-201ENST00000384889 81 ntBASIC-1□□□□□ -2.57
LSM1O15116 RNU7-164P-201ENST00000459221 62 ntBASIC-1□□□□□ -2.57
LSM1O15116 RNU6-240P-201ENST00000516098 97 ntBASIC-1□□□□□ -2.57
LSM1O15116 AC138907.4-201ENST00000570107 226 ntBASIC-1□□□□□ -2.57
LSM1O15116 MIR548S-201ENST00000581352 82 ntBASIC-1□□□□□ -2.57
LSM1O15116 AC021443.1-201ENST00000604478 211 ntBASIC-1□□□□□ -2.57
LSM1O15116 MIR376B-201ENST00000614515 100 ntBASIC-1□□□□□ -2.57
LSM1O15116 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.01□□□□□ -2.57
LSM1O15116 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.01□□□□□ -2.57
LSM1O15116 RNY3P14-201ENST00000384309 102 ntBASIC-1.01□□□□□ -2.57
LSM1O15116 RNU6-455P-201ENST00000384681 107 ntBASIC-1.01□□□□□ -2.57
LSM1O15116 AL160413.1-201ENST00000622780 310 ntBASIC-1.01□□□□□ -2.57
LSM1O15116 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.02□□□□□ -2.57
LSM1O15116 MIR9-2-201ENST00000384838 87 ntBASIC-1.02□□□□□ -2.57
LSM1O15116 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.02□□□□□ -2.57
LSM1O15116 AC009779.6-201ENST00000603972 165 ntBASIC-1.02□□□□□ -2.57
LSM1O15116 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.02□□□□□ -2.57
LSM1O15116 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.02□□□□□ -2.57
LSM1O15116 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.03□□□□□ -2.57
LSM1O15116 RNY3P16-201ENST00000516338 101 ntBASIC-1.03□□□□□ -2.57
LSM1O15116 AC108676.2-201ENST00000605225 163 ntBASIC-1.03□□□□□ -2.57
LSM1O15116 RNU6-275P-201ENST00000364910 107 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 SNORD115-35-201ENST00000365122 82 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 RNU6-154P-201ENST00000384306 106 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 MT-TY-201ENST00000387409 66 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 SNORD77B-201ENST00000391112 67 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 MIR548P-201ENST00000408336 84 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 RNU6-985P-201ENST00000410182 104 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 MIR2113-201ENST00000459007 91 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 MIR4460-201ENST00000577862 86 ntBASIC-1.04□□□□□ -2.58
LSM1O15116 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.05□□□□□ -2.58
LSM1O15116 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.05□□□□□ -2.58
LSM1O15116 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.05□□□□□ -2.58
LSM1O15116 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.05□□□□□ -2.58
LSM1O15116 RNU6-850P-201ENST00000516934 103 ntBASIC-1.05□□□□□ -2.58
LSM1O15116 MIR3149-201ENST00000584629 83 ntBASIC-1.05□□□□□ -2.58
LSM1O15116 AC087741.2-201ENST00000619415 172 ntBASIC-1.05□□□□□ -2.58
LSM1O15116 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 RNU6-47P-201ENST00000383866 107 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 MT-TW-201ENST00000387382 68 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 AC022028.1-201ENST00000412054 408 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 AC074198.2-201ENST00000508153 258 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 MIR4436A-201ENST00000585278 85 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 AC093726.3-201ENST00000637588 150 ntBASIC-1.06□□□□□ -2.58
LSM1O15116 RNY4P28-201ENST00000365281 93 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 RNU6-35P-201ENST00000384530 107 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 AC007012.1-201ENST00000567192 175 ntBASIC-1.07□□□□□ -2.58
LSM1O15116 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 SNORA51.5-201ENST00000384126 131 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 RNU6-616P-201ENST00000384353 107 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 RNU6-768P-201ENST00000384683 107 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 MIR516A2-201ENST00000384888 90 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 MIR516A1-201ENST00000385033 90 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 MIR1265-201ENST00000408444 86 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 MTND1P19-201ENST00000511780 315 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 RNU6-287P-201ENST00000516230 98 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 AC020661.2-201ENST00000560114 134 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 MIR4308-201ENST00000580634 81 ntBASIC-1.08□□□□□ -2.58
LSM1O15116 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 RNU6-900P-201ENST00000384498 102 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 MT-TQ-201ENST00000387372 72 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 RNU6-493P-201ENST00000391321 108 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 RNU4-63P-201ENST00000411313 118 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 MTATP6P21-201ENST00000440681 189 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 RNA5SP169-201ENST00000517268 117 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 MIR3171-201ENST00000584270 74 ntBASIC-1.09□□□□□ -2.58
LSM1O15116 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.1□□□□□ -2.59
LSM1O15116 SNORD95.1-201ENST00000364099 68 ntBASIC-1.1□□□□□ -2.59
LSM1O15116 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.1□□□□□ -2.59
LSM1O15116 MIR34C-201ENST00000384831 77 ntBASIC-1.1□□□□□ -2.59
LSM1O15116 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.1□□□□□ -2.59
LSM1O15116 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.1□□□□□ -2.59
LSM1O15116 MIR20A-201ENST00000362279 71 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms