Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL359881.1-201ENST00000602916 267 ntBASIC-0.28□□□□□ -2.45
CUX2O14529 RNU4-69P-201ENST00000410677 143 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNU7-164P-201ENST00000459221 62 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNU2-35P-201ENST00000516446 142 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 AL117187.1-201ENST00000555482 181 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 AC021443.1-201ENST00000604478 211 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNU1-29P-201ENST00000606574 126 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNA5SP163-201ENST00000410304 99 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNU7-165P-201ENST00000458864 60 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNU6-240P-201ENST00000516098 97 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
CUX2O14529 AC073869.9-201ENST00000641610 120 ntBASIC-0.29□□□□□ -2.46
CUX2O14529 RNU6-312P-201ENST00000364629 107 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 RNU6-449P-201ENST00000383914 107 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 RNU6-768P-201ENST00000384683 107 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 MIR548H2-201ENST00000408874 88 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 RNA5SP236-201ENST00000516169 116 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 MIR548AD-201ENST00000584780 82 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 SNORA70.25-201ENST00000612741 95 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.3□□□□□ -2.46
CUX2O14529 RNU6-509P-201ENST00000363519 107 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 RNA5SP205-201ENST00000364653 136 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 SNORD110-201ENST00000408189 75 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 MIR548F4-201ENST00000408515 105 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 TRAJ51-201ENST00000504127 63 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.31□□□□□ -2.46
CUX2O14529 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.31□□□□□ -2.46
CUX2O14529 SNORA63-201ENST00000363450 132 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 RNA5SP403-201ENST00000363598 108 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 MIR599-201ENST00000385069 95 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 MIR501-201ENST00000390204 84 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 SNORD41.1-201ENST00000391000 69 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 RNU6-588P-201ENST00000410281 105 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 RNU7-48P-201ENST00000458875 63 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 RNU2-60P-201ENST00000517290 128 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
CUX2O14529 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.33□□□□□ -2.46
CUX2O14529 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.33□□□□□ -2.46
CUX2O14529 SNORD77B-201ENST00000391112 67 ntBASIC-0.33□□□□□ -2.46
CUX2O14529 MIR1302-3-201ENST00000408128 138 ntBASIC-0.33□□□□□ -2.46
CUX2O14529 BX276092.1-201ENST00000427368 251 ntBASIC-0.33□□□□□ -2.46
CUX2O14529 IGKV1-22-201ENST00000524313 326 ntBASIC-0.33□□□□□ -2.46
CUX2O14529 AC009779.6-201ENST00000603972 165 ntBASIC-0.33□□□□□ -2.46
CUX2O14529 SNORA18.1-201ENST00000363418 128 ntBASIC-0.34□□□□□ -2.46
CUX2O14529 MIR548I2-201ENST00000408348 149 ntBASIC-0.34□□□□□ -2.46
CUX2O14529 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.34□□□□□ -2.46
CUX2O14529 RNU6-180P-201ENST00000516697 61 ntBASIC-0.34□□□□□ -2.46
CUX2O14529 AC084368.1-201ENST00000620935 65 ntBASIC-0.34□□□□□ -2.46
CUX2O14529 SNORD58.1-201ENST00000391313 66 ntBASIC-0.35□□□□□ -2.46
CUX2O14529 AC108059.2-201ENST00000434626 151 ntBASIC-0.35□□□□□ -2.46
CUX2O14529 RNU4-71P-201ENST00000516258 113 ntBASIC-0.35□□□□□ -2.46
CUX2O14529 MIR3925-201ENST00000584674 77 ntBASIC-0.35□□□□□ -2.46
CUX2O14529 uc_338.28-201ENST00000612082 187 ntBASIC-0.35□□□□□ -2.46
CUX2O14529 RNU6-756P-201ENST00000383997 107 ntBASIC-0.35□□□□□ -2.47
CUX2O14529 RNU4-63P-201ENST00000411313 118 ntBASIC-0.35□□□□□ -2.47
CUX2O14529 AC107027.2-201ENST00000512197 115 ntBASIC-0.35□□□□□ -2.47
CUX2O14529 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.36□□□□□ -2.47
CUX2O14529 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.36□□□□□ -2.47
CUX2O14529 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.36□□□□□ -2.47
CUX2O14529 MIR206-201ENST00000384872 86 ntBASIC-0.36□□□□□ -2.47
CUX2O14529 AC006210.1-201ENST00000424882 111 ntBASIC-0.36□□□□□ -2.47
CUX2O14529 MIR3128-201ENST00000581957 66 ntBASIC-0.36□□□□□ -2.47
CUX2O14529 MIR4677-201ENST00000584153 80 ntBASIC-0.36□□□□□ -2.47
CUX2O14529 SNORA20.1-201ENST00000364790 130 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 RNU6-738P-201ENST00000384531 106 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 RNU6-918P-201ENST00000391219 106 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 SNORA75.5-201ENST00000391291 81 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 RNU7-74P-201ENST00000459104 62 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 RNU7-123P-201ENST00000515911 60 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 MIR3646-201ENST00000578301 84 ntBASIC-0.37□□□□□ -2.47
CUX2O14529 SNORA75.1-201ENST00000391130 148 ntBASIC-0.38□□□□□ -2.47
CUX2O14529 SNORD4A-201ENST00000459174 72 ntBASIC-0.38□□□□□ -2.47
CUX2O14529 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.39□□□□□ -2.47
CUX2O14529 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.39□□□□□ -2.47
CUX2O14529 SNORD115-35-201ENST00000365122 82 ntBASIC-0.39□□□□□ -2.47
CUX2O14529 RNU7-2P-201ENST00000516096 62 ntBASIC-0.39□□□□□ -2.47
CUX2O14529 AC062037.2-201ENST00000610137 73 ntBASIC-0.39□□□□□ -2.47
CUX2O14529 AP001362.1-201ENST00000625165 124 ntBASIC-0.39□□□□□ -2.47
CUX2O14529 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.4□□□□□ -2.47
CUX2O14529 RNU4-32P-201ENST00000363404 141 ntBASIC-0.4□□□□□ -2.47
CUX2O14529 RNU6-309P-201ENST00000364573 106 ntBASIC-0.4□□□□□ -2.47
CUX2O14529 RNU6-865P-201ENST00000364772 107 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 376.9 ms