Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MIR3179-1-201ENST00000578940 84 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 MIR3179-2-201ENST00000579107 84 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 MIR3179-3-201ENST00000579566 84 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 MIR3179-4-201ENST00000617599 84 ntBASIC-0.83□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 RNU6-287P-201ENST00000516230 98 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.84□□□□□ -2.54
RBFOX3A6NFN3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 RNU6-103P-201ENST00000363686 107 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 AC244090.1-201ENST00000441884 93 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 RNU2-35P-201ENST00000516446 142 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 MIR4499-201ENST00000584834 69 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 AP001362.1-201ENST00000625165 124 ntBASIC-0.85□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 MIR518B-201ENST00000385127 83 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 SPINT5P-201ENST00000448174 155 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 RNY3P15-201ENST00000516297 97 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 SNORD22.1-201ENST00000516331 125 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 MIR5704-201ENST00000584029 77 ntBASIC-0.86□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 RNU4-17P-201ENST00000365598 141 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 RNU6-571P-201ENST00000384128 107 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 MIR516A2-201ENST00000384888 90 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 MIR516A1-201ENST00000385033 90 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 MIR517B-201ENST00000385102 67 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 RBMX2P4-201ENST00000441256 376 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 AC007012.1-201ENST00000567192 175 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 uc_338.19-201ENST00000616808 99 ntBASIC-0.87□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 RNY3P1-201ENST00000365085 102 ntBASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 RNU6-806P-201ENST00000365147 105 ntBASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 AC009779.6-201ENST00000603972 165 ntBASIC-0.88□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 RNU6-973P-201ENST00000364690 107 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 AL161932.1-201ENST00000437408 146 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 AP000533.3-201ENST00000447704 118 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 SCARNA18B-201ENST00000458806 135 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 RNU6-274P-201ENST00000459566 107 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 AC022137.1-201ENST00000483735 151 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 RNU6-850P-201ENST00000516934 103 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 RNU2-4P-201ENST00000606190 192 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 MIR376B-201ENST00000614515 100 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 MIR8068-201ENST00000618032 68 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 AL365265.1-201ENST00000621045 234 ntBASIC-0.89□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 SNORD115-35-201ENST00000365122 82 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 RNU6-690P-201ENST00000365242 106 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 RNU4-69P-201ENST00000410677 143 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 AL121914.1-201ENST00000450188 156 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 U6.100-201ENST00000636230 99 ntBASIC-0.9□□□□□ -2.55
RBFOX3A6NFN3 SNORD42.2-201ENST00000365570 69 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 RNU6-431P-201ENST00000383874 107 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 RNU6-476P-201ENST00000384726 107 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 RNU6-651P-201ENST00000411040 105 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 AC113618.1-201ENST00000416747 285 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 AC097510.1-201ENST00000510945 133 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 RNU7-2P-201ENST00000516096 62 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 RNU6-875P-201ENST00000516488 106 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 MIR4282-201ENST00000583613 67 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 AC087741.2-201ENST00000619415 172 ntBASIC-0.91□□□□□ -2.56
RBFOX3A6NFN3 TRDV1-202ENST00000621643 102 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms