Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 MIR4460-201ENST00000577862 86 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 AC011603.4-201ENST00000611325 277 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 MIR6851-201ENST00000617060 67 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 MIR652-201ENST00000385278 98 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 AL589823.1-201ENST00000429577 183 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 SNORD57-201ENST00000448188 72 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 RNU7-74P-201ENST00000459104 62 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 RNU2-35P-201ENST00000516446 142 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 SNORA27.4-201ENST00000516650 95 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 AC112487.2-201ENST00000637950 304 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 UBE2WP1-201ENST00000362030 340 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 SNORA51.5-201ENST00000384126 131 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNY1P6-201ENST00000384193 109 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR519A1-201ENST00000385257 85 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-11-201ENST00000408051 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-9-201ENST00000408365 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-10-201ENST00000408734 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR2113-201ENST00000459007 91 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-570P-201ENST00000517051 105 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-2-201ENST00000607096 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 SNORD115-44-201ENST00000365391 82 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 MIR206-201ENST00000384872 86 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 MT-TY-201ENST00000387409 66 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-287P-201ENST00000516230 98 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 MIR5704-201ENST00000584029 77 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 AC009779.6-201ENST00000603972 165 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MIR548I2-201ENST00000408348 149 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-651P-201ENST00000411040 105 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 AL161932.1-201ENST00000437408 146 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNU7-48P-201ENST00000458875 63 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 AC021146.6-201ENST00000514659 117 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MIR8068-201ENST00000618032 68 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MTND5P18-201ENST00000445624 1801 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR20A-201ENST00000362279 71 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-170P-201ENST00000362832 104 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-978P-201ENST00000364371 103 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-571P-201ENST00000384128 107 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR516A2-201ENST00000384888 90 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR516A1-201ENST00000385033 90 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR616-201ENST00000385293 97 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 AL500527.2-201ENST00000454105 95 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-277P-201ENST00000516272 106 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 AC090574.1-201ENST00000623186 233 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 SNORA79-201ENST00000408376 140 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 AC093783.1-201ENST00000612976 329 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 AC097510.1-201ENST00000510945 133 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR376B-201ENST00000614515 100 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR6738-201ENST00000619620 64 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR409-201ENST00000362237 79 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 RNU6-806P-201ENST00000365147 105 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 MIR587-201ENST00000384845 96 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 MIR517B-201ENST00000385102 67 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 AC244090.1-201ENST00000441884 93 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms