Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 MIR4460-201ENST00000577862 86 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 AC011603.4-201ENST00000611325 277 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 MIR6851-201ENST00000617060 67 ntBASIC-0.83□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 MIR652-201ENST00000385278 98 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 AL589823.1-201ENST00000429577 183 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 SNORD57-201ENST00000448188 72 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 RNU7-74P-201ENST00000459104 62 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 RNU2-35P-201ENST00000516446 142 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 SNORA27.4-201ENST00000516650 95 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 AC112487.2-201ENST00000637950 304 ntBASIC-0.84□□□□□ -2.54
RHBDD3Q9Y3P4 UBE2WP1-201ENST00000362030 340 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 SNORA51.5-201ENST00000384126 131 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNY1P6-201ENST00000384193 109 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR519A1-201ENST00000385257 85 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-11-201ENST00000408051 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-9-201ENST00000408365 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-10-201ENST00000408734 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR2113-201ENST00000459007 91 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-881P-201ENST00000516813 102 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-570P-201ENST00000517051 105 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 MIR1302-2-201ENST00000607096 138 ntBASIC-0.85□□□□□ -2.55
RHBDD3Q9Y3P4 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 SNORD115-44-201ENST00000365391 82 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 MIR206-201ENST00000384872 86 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 MT-TY-201ENST00000387409 66 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-287P-201ENST00000516230 98 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 MIR5704-201ENST00000584029 77 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 AC009779.6-201ENST00000603972 165 ntBASIC-0.86□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MIR548I2-201ENST00000408348 149 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-651P-201ENST00000411040 105 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 AL161932.1-201ENST00000437408 146 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNU7-48P-201ENST00000458875 63 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 AC021146.6-201ENST00000514659 117 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MIR8068-201ENST00000618032 68 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MTND5P18-201ENST00000445624 1801 ntBASIC-0.87□□□□□ -2.55
RHBDD3Q9Y3P4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR20A-201ENST00000362279 71 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-170P-201ENST00000362832 104 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-978P-201ENST00000364371 103 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-571P-201ENST00000384128 107 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR516A2-201ENST00000384888 90 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR516A1-201ENST00000385033 90 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 MIR616-201ENST00000385293 97 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 AL500527.2-201ENST00000454105 95 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-277P-201ENST00000516272 106 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 AC090574.1-201ENST00000623186 233 ntBASIC-0.88□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 SNORA79-201ENST00000408376 140 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 AC093783.1-201ENST00000612976 329 ntBASIC-0.89□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 AC097510.1-201ENST00000510945 133 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR376B-201ENST00000614515 100 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR6738-201ENST00000619620 64 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.9□□□□□ -2.55
RHBDD3Q9Y3P4 MIR409-201ENST00000362237 79 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 RNU6-806P-201ENST00000365147 105 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 MIR587-201ENST00000384845 96 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 MIR517B-201ENST00000385102 67 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 AC244090.1-201ENST00000441884 93 ntBASIC-0.91□□□□□ -2.56
RHBDD3Q9Y3P4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms