Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.38□□□□□ -2.19
USP25Q9UHP3 MIR6504-201ENST00000613520 61 ntBASIC1.38□□□□□ -2.19
USP25Q9UHP3 Y_RNA.818-201ENST00000618813 71 ntBASIC1.38□□□□□ -2.19
USP25Q9UHP3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
USP25Q9UHP3 RNU6-832P-201ENST00000363319 107 ntBASIC1.37□□□□□ -2.19
USP25Q9UHP3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.37□□□□□ -2.19
USP25Q9UHP3 MIR1276-201ENST00000408707 83 ntBASIC1.37□□□□□ -2.19
USP25Q9UHP3 SNORA7.5-201ENST00000410672 110 ntBASIC1.37□□□□□ -2.19
USP25Q9UHP3 SNORA4-201ENST00000584302 138 ntBASIC1.37□□□□□ -2.19
USP25Q9UHP3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USP25Q9UHP3 RNU4-36P-201ENST00000364294 144 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 RNA5SP89-201ENST00000410300 108 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 SNORA19.1-201ENST00000410656 129 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 MIR18B-201ENST00000454574 71 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.36□□□□□ -2.19
USP25Q9UHP3 RNU7-90P-201ENST00000459216 62 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 RNU6-158P-201ENST00000517104 100 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 AC141557.1-201ENST00000540982 400 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 uc_338.6-201ENST00000613544 171 ntBASIC1.36□□□□□ -2.19
USP25Q9UHP3 AC008163.1-202ENST00000636004 2889 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 Y_RNA.10-201ENST00000362371 110 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 MIR590-201ENST00000385008 97 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 RNA5SP95-201ENST00000410319 137 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 snoU13.18-201ENST00000459483 104 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 DEFB131E-201ENST00000532329 154 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
USP25Q9UHP3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
USP25Q9UHP3 SNORD113.3-201ENST00000364630 78 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 Y_RNA.601-201ENST00000410500 113 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 RNU7-48P-201ENST00000458875 63 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 AC036111.3-201ENST00000526389 112 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 AL442128.1-201ENST00000615151 90 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 AP001318.4-201ENST00000616637 121 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 AC012676.2-201ENST00000619258 186 ntBASIC1.34□□□□□ -2.19
USP25Q9UHP3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.33□□□□□ -2.2
USP25Q9UHP3 AC096949.1-201ENST00000412047 152 ntBASIC1.33□□□□□ -2.2
USP25Q9UHP3 MRPL35P3-201ENST00000421557 364 ntBASIC1.33□□□□□ -2.2
USP25Q9UHP3 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
USP25Q9UHP3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
USP25Q9UHP3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 RNU6-865P-201ENST00000364772 107 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 RNY1P2-201ENST00000364820 117 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 SNORA2B-201ENST00000384583 137 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 U8.15-201ENST00000390947 134 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 SCARNA23-201ENST00000516060 130 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 AC133485.1-201ENST00000567176 124 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 MIR376B-201ENST00000614515 100 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 AC106800.4-201ENST00000614905 153 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 AC105081.1-201ENST00000617727 106 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 AP001362.1-201ENST00000625165 124 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 AL512310.12-203ENST00000640543 90 ntBASIC1.32□□□□□ -2.2
USP25Q9UHP3 Y_RNA.93-201ENST00000363066 109 ntBASIC1.31□□□□□ -2.2
USP25Q9UHP3 MIR34C-201ENST00000384831 77 ntBASIC1.31□□□□□ -2.2
USP25Q9UHP3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
USP25Q9UHP3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.31□□□□□ -2.2
USP25Q9UHP3 SNORD38.1-201ENST00000363863 68 ntBASIC1.3□□□□□ -2.2
USP25Q9UHP3 RNU6-905P-201ENST00000384434 107 ntBASIC1.3□□□□□ -2.2
USP25Q9UHP3 SNORD111-201ENST00000408139 94 ntBASIC1.3□□□□□ -2.2
USP25Q9UHP3 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
USP25Q9UHP3 Y_RNA.694-201ENST00000516677 117 ntBASIC1.3□□□□□ -2.2
USP25Q9UHP3 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
USP25Q9UHP3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.3□□□□□ -2.2
USP25Q9UHP3 AC096720.1-201ENST00000604441 183 ntBASIC1.3□□□□□ -2.2
USP25Q9UHP3 RNU6-1298P-201ENST00000362456 101 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 RNU6-640P-201ENST00000363693 105 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 SNORD45B-201ENST00000364617 72 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 MIR200A-201ENST00000384875 90 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 MIR489-201ENST00000384923 84 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 RNU6-109P-201ENST00000516364 107 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 RNU6-184P-201ENST00000516514 107 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 AC138749.4-201ENST00000563970 127 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 MIR4452-201ENST00000583004 71 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 MIR4439-201ENST00000583746 80 ntBASIC1.29□□□□□ -2.2
USP25Q9UHP3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USP25Q9UHP3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USP25Q9UHP3 HSBP1P2-201ENST00000299671 229 ntBASIC1.28□□□□□ -2.2
USP25Q9UHP3 Y_RNA.107-201ENST00000363190 121 ntBASIC1.28□□□□□ -2.2
USP25Q9UHP3 SNORD114-24-201ENST00000365029 72 ntBASIC1.28□□□□□ -2.2
USP25Q9UHP3 MTATP8P2-201ENST00000435212 202 ntBASIC1.28□□□□□ -2.2
USP25Q9UHP3 SNORA40.13-201ENST00000516379 120 ntBASIC1.28□□□□□ -2.2
USP25Q9UHP3 MIR2052-201ENST00000636055 55 ntBASIC1.28□□□□□ -2.2
USP25Q9UHP3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
USP25Q9UHP3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
USP25Q9UHP3 RNU6-170P-201ENST00000362832 104 ntBASIC1.27□□□□□ -2.21
USP25Q9UHP3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.27□□□□□ -2.21
USP25Q9UHP3 SNORD38.2-201ENST00000384470 69 ntBASIC1.27□□□□□ -2.21
USP25Q9UHP3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms