Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 MIR8066-201ENST00000617280 78 ntBASIC0.85□□□□□ -2.27
ABCF3Q9NUQ8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.27
ABCF3Q9NUQ8 SNORA63.5-201ENST00000363548 123 ntBASIC0.84□□□□□ -2.27
ABCF3Q9NUQ8 RNU6-1081P-201ENST00000384537 107 ntBASIC0.84□□□□□ -2.27
ABCF3Q9NUQ8 RPL39P25-201ENST00000449384 154 ntBASIC0.84□□□□□ -2.27
ABCF3Q9NUQ8 SNORA25.16-201ENST00000516741 121 ntBASIC0.84□□□□□ -2.27
ABCF3Q9NUQ8 AC138749.4-201ENST00000563970 127 ntBASIC0.84□□□□□ -2.27
ABCF3Q9NUQ8 U6.109-201ENST00000636749 87 ntBASIC0.84□□□□□ -2.27
ABCF3Q9NUQ8 MIR1-1-201ENST00000362147 71 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 SNORD115-35-201ENST00000365122 82 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-880P-201ENST00000384526 107 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 RNU4-83P-201ENST00000410863 133 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 AC067940.1-201ENST00000458411 300 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-977P-201ENST00000516411 103 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-521P-201ENST00000516663 105 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 MIR4679-2-201ENST00000578358 77 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 AC025627.3-201ENST00000582078 182 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 MIR8070-201ENST00000616510 88 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-403P-201ENST00000363163 104 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNA5SP133-201ENST00000363368 119 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU4-67P-201ENST00000364569 141 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.273-201ENST00000364703 102 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 SNORA72.6-201ENST00000384520 129 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 MIR520F-201ENST00000384824 87 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 MIR34C-201ENST00000384831 77 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-816P-201ENST00000390914 107 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-679P-201ENST00000391003 106 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-1268P-201ENST00000391214 107 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-1239P-201ENST00000391310 107 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 SNORA7.5-201ENST00000410672 110 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU7-56P-201ENST00000458744 62 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU7-102P-201ENST00000458948 62 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU7-156P-201ENST00000517214 74 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 SNORD92-201ENST00000585078 85 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 AL353765.1-201ENST00000605514 183 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 MIR376B-201ENST00000614515 100 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 AL162726.3-218ENST00000636401 95 ntBASIC0.82□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-363P-201ENST00000362895 105 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.281-201ENST00000364774 94 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-1056P-201ENST00000383996 107 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 MIR938-201ENST00000401216 83 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 AL606490.4-201ENST00000423117 127 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 RNU7-48P-201ENST00000458875 63 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 U7.7-201ENST00000459276 60 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-589P-201ENST00000516485 107 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-834P-201ENST00000362367 110 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.85-201ENST00000363014 111 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.116-201ENST00000363292 103 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 MIR520H-201ENST00000385126 88 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.629-201ENST00000411368 105 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-531P-201ENST00000516694 104 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 AL136317.1-201ENST00000612653 226 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 MIR6082-201ENST00000613604 109 ntBASIC0.8□□□□□ -2.28
ABCF3Q9NUQ8 U8.6-201ENST00000364939 135 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 SNORA25.9-201ENST00000365087 128 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-364P-201ENST00000384387 107 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 MIR520E-201ENST00000384867 87 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 RPS29P1-201ENST00000465274 159 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 RPL39P34-201ENST00000477141 156 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 AC090897.1-201ENST00000580909 226 ntBASIC0.79□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.155-201ENST00000363632 101 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.247-201ENST00000364500 92 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-865P-201ENST00000364772 107 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 RNY1P2-201ENST00000364820 117 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 Y_RNA.360-201ENST00000365512 102 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 MIR1276-201ENST00000408707 83 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 AC068339.1-201ENST00000526965 141 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 MIR548AI-201ENST00000579940 88 ntBASIC0.78□□□□□ -2.28
ABCF3Q9NUQ8 RNU6-1313P-201ENST00000362622 102 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU6-1107P-201ENST00000364817 104 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU6-1325P-201ENST00000364905 105 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU6-409P-201ENST00000384114 104 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 Y_RNA.507-201ENST00000384500 99 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 SNORD20-201ENST00000384550 80 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU1-119P-201ENST00000391122 165 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 SNORD99-201ENST00000408612 74 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU6-447P-201ENST00000410293 104 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 MIR1912-201ENST00000410389 80 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.77□□□□□ -2.29
ABCF3Q9NUQ8 RNU6-355P-201ENST00000410427 104 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 357.4 ms