Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 MIR4713-201ENST00000582691 75 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 MIR7111-201ENST00000619751 72 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATG3Q9NT62 AL359851.1-201ENST00000569460 4997 ntBASIC2.27□□□□□ -2.05
ATG3Q9NT62 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ATG3Q9NT62 RNU6-315P-201ENST00000362666 107 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 RNU4-32P-201ENST00000363404 141 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 RNU6-624P-201ENST00000363411 107 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 Y_RNA.168-201ENST00000363740 102 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 RNU6-203P-201ENST00000384038 104 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 SNORA31.17-201ENST00000516953 127 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 AC090897.1-201ENST00000580909 226 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 U7.4-201ENST00000614961 63 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 MIR8070-201ENST00000616510 88 ntBASIC2.26□□□□□ -2.05
ATG3Q9NT62 MIR676-201ENST00000390702 67 ntBASIC2.25□□□□□ -2.05
ATG3Q9NT62 MIR1236-201ENST00000408340 102 ntBASIC2.25□□□□□ -2.05
ATG3Q9NT62 HMGN2P19-201ENST00000425149 265 ntBASIC2.25□□□□□ -2.05
ATG3Q9NT62 AC244023.1-201ENST00000426884 112 ntBASIC2.25□□□□□ -2.05
ATG3Q9NT62 RNA5SP481-201ENST00000516814 122 ntBASIC2.25□□□□□ -2.05
ATG3Q9NT62 AC242498.1-201ENST00000604134 111 ntBASIC2.25□□□□□ -2.05
ATG3Q9NT62 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.25□□□□□ -2.05
ATG3Q9NT62 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
ATG3Q9NT62 SNORA16.1-201ENST00000364597 132 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 SNORD38B-201ENST00000384690 67 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ATG3Q9NT62 SUMO2P12-201ENST00000405924 140 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 AC027119.1-201ENST00000440877 241 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 AC005908.1-201ENST00000468701 347 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 TRMT112P2-201ENST00000512910 132 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 RNA5SP364-201ENST00000516938 78 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.24□□□□□ -2.05
ATG3Q9NT62 AL662814.1-201ENST00000617364 121 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 SNORD38B-202ENST00000625943 69 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 MIR4251-201ENST00000635819 61 ntBASIC2.24□□□□□ -2.05
ATG3Q9NT62 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ATG3Q9NT62 AC009474.2-201ENST00000451383 136 ntBASIC2.23□□□□□ -2.05
ATG3Q9NT62 RNU7-95P-201ENST00000459222 64 ntBASIC2.23□□□□□ -2.05
ATG3Q9NT62 AC138749.4-201ENST00000563970 127 ntBASIC2.23□□□□□ -2.05
ATG3Q9NT62 MIR502-201ENST00000606349 86 ntBASIC2.23□□□□□ -2.05
ATG3Q9NT62 MIR8066-201ENST00000617280 78 ntBASIC2.23□□□□□ -2.05
ATG3Q9NT62 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATG3Q9NT62 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ATG3Q9NT62 RNY1P2-201ENST00000364820 117 ntBASIC2.22□□□□□ -2.05
ATG3Q9NT62 Y_RNA.545-201ENST00000384652 105 ntBASIC2.22□□□□□ -2.05
ATG3Q9NT62 AC133485.1-201ENST00000567176 124 ntBASIC2.22□□□□□ -2.05
ATG3Q9NT62 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
ATG3Q9NT62 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ATG3Q9NT62 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.21□□□□□ -2.06
ATG3Q9NT62 SNRPGP12-201ENST00000449481 213 ntBASIC2.21□□□□□ -2.06
ATG3Q9NT62 SCARNA18B-201ENST00000458806 135 ntBASIC2.21□□□□□ -2.06
ATG3Q9NT62 RN7SL274P-201ENST00000492268 272 ntBASIC2.21□□□□□ -2.06
ATG3Q9NT62 MIR4500-201ENST00000579472 76 ntBASIC2.21□□□□□ -2.06
ATG3Q9NT62 PRELID3BP2-201ENST00000605362 201 ntBASIC2.21□□□□□ -2.06
ATG3Q9NT62 AC103810.8-201ENST00000607347 118 ntBASIC2.21□□□□□ -2.06
ATG3Q9NT62 RNU6-949P-201ENST00000384040 107 ntBASIC2.2□□□□□ -2.06
ATG3Q9NT62 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ATG3Q9NT62 RNA5SP237-201ENST00000410414 113 ntBASIC2.2□□□□□ -2.06
ATG3Q9NT62 RNU6-850P-201ENST00000516934 103 ntBASIC2.2□□□□□ -2.06
ATG3Q9NT62 MIR3134-201ENST00000579433 74 ntBASIC2.2□□□□□ -2.06
ATG3Q9NT62 MIRLET7A1-201ENST00000362295 80 ntBASIC2.19□□□□□ -2.06
ATG3Q9NT62 Y_RNA.508-201ENST00000384502 114 ntBASIC2.19□□□□□ -2.06
ATG3Q9NT62 MIR194-1-201ENST00000384892 85 ntBASIC2.19□□□□□ -2.06
ATG3Q9NT62 AC114801.3-201ENST00000510231 177 ntBASIC2.19□□□□□ -2.06
ATG3Q9NT62 AL645939.4-201ENST00000604495 135 ntBASIC2.19□□□□□ -2.06
ATG3Q9NT62 MIR337-201ENST00000362281 93 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 RNU6-1094P-201ENST00000362416 104 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 SNORA63.2-201ENST00000362603 126 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 MIR653-201ENST00000385279 96 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 RNA5SP292-201ENST00000390974 118 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 MIR1302-7-201ENST00000408841 72 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 RNA5SP489-201ENST00000410986 109 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 BX276092.1-201ENST00000427368 251 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 snoU13.2-201ENST00000459201 104 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 snoU13.11-201ENST00000459219 104 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.18□□□□□ -2.06
ATG3Q9NT62 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 MIR4419B-201ENST00000577260 68 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
ATG3Q9NT62 AL512598.1-201ENST00000610158 273 ntBASIC2.18□□□□□ -2.06
ATG3Q9NT62 RNU6-439P-201ENST00000384188 106 ntBASIC2.17□□□□□ -2.06
ATG3Q9NT62 Y_RNA.532-201ENST00000384590 113 ntBASIC2.17□□□□□ -2.06
ATG3Q9NT62 MIR3192-201ENST00000584920 77 ntBASIC2.17□□□□□ -2.06
ATG3Q9NT62 AP000753.3-201ENST00000604083 169 ntBASIC2.17□□□□□ -2.06
ATG3Q9NT62 U6.109-201ENST00000636749 87 ntBASIC2.17□□□□□ -2.06
ATG3Q9NT62 AL161722.3-201ENST00000605789 2983 ntBASIC2.17□□□□□ -2.06
ATG3Q9NT62 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.17□□□□□ -2.06
ATG3Q9NT62 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ATG3Q9NT62 RNU6-1123P-201ENST00000362347 106 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 RNU6-161P-201ENST00000363051 106 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 MIR588-201ENST00000384900 83 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 MIR499A-201ENST00000384903 122 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 Y_RNA.648-201ENST00000459455 110 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 AC023790.1-201ENST00000482174 347 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 RNU6-557P-201ENST00000516842 110 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 MIR4796-201ENST00000580742 81 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 MIR6740-201ENST00000618268 113 ntBASIC2.16□□□□□ -2.06
ATG3Q9NT62 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ATG3Q9NT62 WWP1P1-201ENST00000466609 2769 ntBASIC2.15□□□□□ -2.06
ATG3Q9NT62 MIR563-201ENST00000385080 79 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms