Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
SSU72Q9NP77 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSU72Q9NP77 RNU6-519P-201ENST00000410590 108 ntBASIC1.87□□□□□ -2.11
SSU72Q9NP77 AC093729.1-201ENST00000513074 128 ntBASIC1.87□□□□□ -2.11
SSU72Q9NP77 RNU6-531P-201ENST00000516694 104 ntBASIC1.87□□□□□ -2.11
SSU72Q9NP77 SNORD36A-201ENST00000362874 73 ntBASIC1.86□□□□□ -2.11
SSU72Q9NP77 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
SSU72Q9NP77 MIR516A2-201ENST00000384888 90 ntBASIC1.86□□□□□ -2.11
SSU72Q9NP77 MIR516A1-201ENST00000385033 90 ntBASIC1.86□□□□□ -2.11
SSU72Q9NP77 RNA5SP508-201ENST00000411327 119 ntBASIC1.86□□□□□ -2.11
SSU72Q9NP77 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
SSU72Q9NP77 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.86□□□□□ -2.11
SSU72Q9NP77 MIR449A-201ENST00000362113 91 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 RNU1-36P-201ENST00000365130 165 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 RNU6-24P-201ENST00000384440 107 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 MIR18B-201ENST00000454574 71 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 RNU7-106P-201ENST00000459514 67 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 AL512310.8-201ENST00000550183 120 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 AL512598.1-201ENST00000610158 273 ntBASIC1.85□□□□□ -2.11
SSU72Q9NP77 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SSU72Q9NP77 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SSU72Q9NP77 RNU6-1054P-201ENST00000411293 104 ntBASIC1.84□□□□□ -2.11
SSU72Q9NP77 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.84□□□□□ -2.11
SSU72Q9NP77 snoU13.11-201ENST00000459219 104 ntBASIC1.84□□□□□ -2.11
SSU72Q9NP77 Y_RNA.648-201ENST00000459455 110 ntBASIC1.84□□□□□ -2.11
SSU72Q9NP77 RPL23AP42-201ENST00000471152 471 ntBASIC1.84□□□□□ -2.11
SSU72Q9NP77 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.84□□□□□ -2.11
SSU72Q9NP77 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
SSU72Q9NP77 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
SSU72Q9NP77 AC131280.1-202ENST00000624067 4211 ntBASIC1.84□□□□□ -2.12
SSU72Q9NP77 RNU4-82P-201ENST00000362443 140 ntBASIC1.83□□□□□ -2.12
SSU72Q9NP77 Y_RNA.363-201ENST00000365529 113 ntBASIC1.83□□□□□ -2.12
SSU72Q9NP77 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
SSU72Q9NP77 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
SSU72Q9NP77 AC048334.1-201ENST00000477975 159 ntBASIC1.83□□□□□ -2.12
SSU72Q9NP77 AC023790.1-201ENST00000482174 347 ntBASIC1.83□□□□□ -2.12
SSU72Q9NP77 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
SSU72Q9NP77 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.83□□□□□ -2.12
SSU72Q9NP77 SNORA64-201ENST00000384674 134 ntBASIC1.82□□□□□ -2.12
SSU72Q9NP77 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SSU72Q9NP77 SNORD93-201ENST00000408813 74 ntBASIC1.82□□□□□ -2.12
SSU72Q9NP77 MIR1273D-201ENST00000577266 86 ntBASIC1.82□□□□□ -2.12
SSU72Q9NP77 MIR3937-201ENST00000580135 106 ntBASIC1.82□□□□□ -2.12
SSU72Q9NP77 RNU6-75P-201ENST00000515944 104 ntBASIC1.81□□□□□ -2.12
SSU72Q9NP77 SNORA25.13-201ENST00000516395 103 ntBASIC1.81□□□□□ -2.12
SSU72Q9NP77 AC036111.3-201ENST00000526389 112 ntBASIC1.81□□□□□ -2.12
SSU72Q9NP77 MIR4712-201ENST00000583750 82 ntBASIC1.81□□□□□ -2.12
SSU72Q9NP77 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SSU72Q9NP77 SNORD33-201ENST00000362761 85 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 RNU4-32P-201ENST00000363404 141 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 SNORA75.2-201ENST00000391138 150 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 SNORA75.3-201ENST00000391231 150 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 MIR1236-201ENST00000408340 102 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.8□□□□□ -2.12
SSU72Q9NP77 RNA5SP233-201ENST00000459153 113 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 RNU7-185P-201ENST00000459215 60 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 MIR4298-201ENST00000584380 73 ntBASIC1.8□□□□□ -2.12
SSU72Q9NP77 RNU4-58P-201ENST00000363192 141 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 RNA5SP126-201ENST00000365092 109 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 RNU6-1065P-201ENST00000384513 106 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SSU72Q9NP77 RNU1-78P-201ENST00000391248 165 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 RNU6-1254P-201ENST00000391266 104 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 SNORD83.1-201ENST00000411362 77 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 AC015818.7-201ENST00000428754 109 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
SSU72Q9NP77 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
SSU72Q9NP77 RNU6-403P-201ENST00000363163 104 ntBASIC1.78□□□□□ -2.12
SSU72Q9NP77 RNU6-624P-201ENST00000363411 107 ntBASIC1.78□□□□□ -2.12
SSU72Q9NP77 RNU6-478P-201ENST00000363904 110 ntBASIC1.78□□□□□ -2.12
SSU72Q9NP77 SNORD100-201ENST00000408573 76 ntBASIC1.78□□□□□ -2.12
SSU72Q9NP77 SNORD63B-201ENST00000411005 70 ntBASIC1.78□□□□□ -2.12
SSU72Q9NP77 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
SSU72Q9NP77 AC013244.2-201ENST00000603396 103 ntBASIC1.78□□□□□ -2.12
SSU72Q9NP77 AC023934.1-201ENST00000574529 2389 ntBASIC1.77□□□□□ -2.13
SSU72Q9NP77 Y_RNA.508-201ENST00000384502 114 ntBASIC1.77□□□□□ -2.13
SSU72Q9NP77 SNORA72.6-201ENST00000384520 129 ntBASIC1.77□□□□□ -2.13
SSU72Q9NP77 RNA5SP292-201ENST00000390974 118 ntBASIC1.77□□□□□ -2.13
SSU72Q9NP77 TRAJ51-201ENST00000504127 63 ntBASIC1.77□□□□□ -2.13
SSU72Q9NP77 AC019288.1-201ENST00000557918 224 ntBASIC1.77□□□□□ -2.13
SSU72Q9NP77 Y_RNA.13-201ENST00000362403 112 ntBASIC1.76□□□□□ -2.13
SSU72Q9NP77 SNORD115-37-201ENST00000363768 82 ntBASIC1.76□□□□□ -2.13
SSU72Q9NP77 SNORD113.3-201ENST00000364630 78 ntBASIC1.76□□□□□ -2.13
SSU72Q9NP77 Y_RNA.283-201ENST00000364798 112 ntBASIC1.76□□□□□ -2.13
SSU72Q9NP77 RNU6-132P-201ENST00000383863 107 ntBASIC1.76□□□□□ -2.13
SSU72Q9NP77 MIR6082-201ENST00000613604 109 ntBASIC1.76□□□□□ -2.13
SSU72Q9NP77 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SSU72Q9NP77 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SSU72Q9NP77 Y_RNA.330-201ENST00000365230 109 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 MIR676-201ENST00000390702 67 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSU72Q9NP77 AL450471.1-201ENST00000447509 127 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 RN7SL429P-201ENST00000479090 223 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 RN7SL489P-201ENST00000486185 223 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 RN7SL327P-201ENST00000488659 223 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 SNORA31.2-201ENST00000516019 134 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 RNU6-1194P-201ENST00000516208 104 ntBASIC1.75□□□□□ -2.13
SSU72Q9NP77 MIR3198-2-201ENST00000577868 80 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms