Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-589P-201ENST00000516485 107 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 MIR4771-2-201ENST00000577758 74 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 MIR4771-1-201ENST00000582617 74 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
USP29Q9HBJ7 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
USP29Q9HBJ7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.07□□□□□ -2.24
USP29Q9HBJ7 AC023934.1-201ENST00000574529 2389 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
USP29Q9HBJ7 RNU6-363P-201ENST00000362895 105 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 RNU6-880P-201ENST00000384526 107 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
USP29Q9HBJ7 RNU6-1321P-201ENST00000390905 107 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 Y_RNA.588-201ENST00000391254 102 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 MIR548J-201ENST00000408833 112 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 RNU6-994P-201ENST00000410507 111 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.06□□□□□ -2.24
USP29Q9HBJ7 MIR4676-201ENST00000583078 72 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 AC105081.1-201ENST00000617727 106 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 AL162726.3-218ENST00000636401 95 ntBASIC1.06□□□□□ -2.24
USP29Q9HBJ7 RNU6-521P-201ENST00000516663 105 ntBASIC1.05□□□□□ -2.24
USP29Q9HBJ7 MIR4491-201ENST00000581087 68 ntBASIC1.05□□□□□ -2.24
USP29Q9HBJ7 MIR6779-201ENST00000617283 64 ntBASIC1.05□□□□□ -2.24
USP29Q9HBJ7 SNORA63.5-201ENST00000363548 123 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 RNU4-67P-201ENST00000364569 141 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 RNU6-215P-201ENST00000365169 102 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 MIR125B2-201ENST00000385128 89 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 MIR1257-201ENST00000408490 117 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 SNORD93-201ENST00000408813 74 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
USP29Q9HBJ7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
USP29Q9HBJ7 MIR1-1-201ENST00000362147 71 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 Y_RNA.448-201ENST00000384185 108 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-816P-201ENST00000390914 107 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-679P-201ENST00000391003 106 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1268P-201ENST00000391214 107 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1239P-201ENST00000391310 107 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-447P-201ENST00000410293 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1118P-201ENST00000410382 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1076P-201ENST00000410397 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-355P-201ENST00000410427 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-791P-201ENST00000410467 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-705P-201ENST00000410601 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1100P-201ENST00000410691 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-860P-201ENST00000410860 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1217P-201ENST00000411276 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-785P-201ENST00000411324 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.03□□□□□ -2.24
USP29Q9HBJ7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 AC138749.4-201ENST00000563970 127 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 MIR4804-201ENST00000581683 73 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 U6.90-201ENST00000614007 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 U6.70-201ENST00000620287 104 ntBASIC1.03□□□□□ -2.24
USP29Q9HBJ7 U8.6-201ENST00000364939 135 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 SNORD20-201ENST00000384550 80 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 MIR1912-201ENST00000410389 80 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 RPL39P25-201ENST00000449384 154 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 RNU7-56P-201ENST00000458744 62 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 RNU7-48P-201ENST00000458875 63 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.709-201ENST00000516952 92 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 AC068339.1-201ENST00000526965 141 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 MIR4661-201ENST00000582720 75 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 SNORD92-201ENST00000585078 85 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 MIR8066-201ENST00000617280 78 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.02□□□□□ -2.25
USP29Q9HBJ7 RNU6-1107P-201ENST00000364817 104 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 RNY1P2-201ENST00000364820 117 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.309-201ENST00000365046 111 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.323-201ENST00000365157 109 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.328-201ENST00000365208 113 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
USP29Q9HBJ7 MIR100-201ENST00000385259 80 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 MIR942-201ENST00000401111 86 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.01□□□□□ -2.25
USP29Q9HBJ7 AC067940.1-201ENST00000458411 300 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 AC133485.1-201ENST00000567176 124 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 MIR376B-201ENST00000614515 100 ntBASIC1.01□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.42-201ENST00000362660 108 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 Y_RNA.507-201ENST00000384500 99 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 MIR605-201ENST00000385078 83 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNY4P18-201ENST00000391107 89 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 MIR938-201ENST00000401216 83 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 SNORA7.5-201ENST00000410672 110 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNU4-83P-201ENST00000410863 133 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNU6-977P-201ENST00000516411 103 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNU6-412P-201ENST00000516434 106 ntBASIC1□□□□□ -2.25
USP29Q9HBJ7 RNU6-1018P-201ENST00000516577 106 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 394 ms