Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MIR206-201ENST00000384872 86 ntBASIC1.13□□□□□ -2.23
CDT1Q9H211 AC002429.1-201ENST00000437672 148 ntBASIC1.13□□□□□ -2.23
CDT1Q9H211 MIR2115-201ENST00000516657 100 ntBASIC1.13□□□□□ -2.23
CDT1Q9H211 AC036111.3-201ENST00000526389 112 ntBASIC1.13□□□□□ -2.23
CDT1Q9H211 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.13□□□□□ -2.23
CDT1Q9H211 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.13□□□□□ -2.23
CDT1Q9H211 AL662814.1-201ENST00000617364 121 ntBASIC1.13□□□□□ -2.23
CDT1Q9H211 Y_RNA.163-201ENST00000363702 113 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU4-67P-201ENST00000364569 141 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 SNORD115-35-201ENST00000365122 82 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU6-580P-201ENST00000365159 107 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU6-1321P-201ENST00000390905 107 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 U8.15-201ENST00000390947 134 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 MIR548J-201ENST00000408833 112 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RPL39P25-201ENST00000449384 154 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU6-412P-201ENST00000516434 106 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU7-137P-201ENST00000516788 62 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 RNU6-537P-201ENST00000517277 103 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 FAM71BP1-201ENST00000604431 523 ntBASIC1.12□□□□□ -2.23
CDT1Q9H211 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CDT1Q9H211 Y_RNA.360-201ENST00000365512 102 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 MIR590-201ENST00000385008 97 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 MIR577-201ENST00000385196 96 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 SNORD12-201ENST00000391002 90 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 RNU7-62P-201ENST00000458856 62 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 RNU7-2P-201ENST00000516096 62 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 AC023827.1-201ENST00000569247 97 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 MIR548Z-201ENST00000584743 97 ntBASIC1.11□□□□□ -2.23
CDT1Q9H211 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CDT1Q9H211 RNU6-1099P-201ENST00000363533 107 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 Y_RNA.155-201ENST00000363632 101 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 Y_RNA.309-201ENST00000365046 111 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 Y_RNA.328-201ENST00000365208 113 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 MT-TN-201ENST00000387400 73 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 RNU6-1165P-201ENST00000410119 107 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 MIR4264-201ENST00000583520 66 ntBASIC1.1□□□□□ -2.23
CDT1Q9H211 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
CDT1Q9H211 RNU6-756P-201ENST00000383997 107 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 RNU6-409P-201ENST00000384114 104 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 SNORA51.5-201ENST00000384126 131 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 Y_RNA.448-201ENST00000384185 108 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 MIR34C-201ENST00000384831 77 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 SNORD77B-201ENST00000391112 67 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 RNA5SP89-201ENST00000410300 108 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 SNORD83.1-201ENST00000411362 77 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 AL031737.1-201ENST00000450125 223 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 AP000753.3-201ENST00000604083 169 ntBASIC1.09□□□□□ -2.23
CDT1Q9H211 Y_RNA.49-201ENST00000362714 112 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 RNU6-949P-201ENST00000384040 107 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 SNORA2B-201ENST00000384583 137 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 RNA5SP237-201ENST00000410414 113 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 RNU6-733P-201ENST00000410759 104 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 RNU6-904P-201ENST00000516206 101 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 RNU6-1006P-201ENST00000516998 103 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 RN7SL793P-201ENST00000583259 296 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 MIR376B-201ENST00000614515 100 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 AC091304.10-201ENST00000641554 121 ntBASIC1.08□□□□□ -2.24
CDT1Q9H211 RNU6-1298P-201ENST00000362456 101 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 RNU6-369P-201ENST00000362515 102 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 SNORD114-10-201ENST00000363409 72 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 Y_RNA.168-201ENST00000363740 102 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 SNORD113.3-201ENST00000364630 78 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 MIR19B1-201ENST00000384829 87 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 MIR1912-201ENST00000410389 80 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 AC141557.1-201ENST00000540982 400 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 AC020891.4-201ENST00000605745 93 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.07□□□□□ -2.24
CDT1Q9H211 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
CDT1Q9H211 RNU6-832P-201ENST00000363319 107 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 RNU6-1201P-201ENST00000384227 107 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 Y_RNA.495-201ENST00000384435 112 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 Y_RNA.507-201ENST00000384500 99 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CDT1Q9H211 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 MIR1302-5-201ENST00000408164 150 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 RNU6-168P-201ENST00000516189 101 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 RNU6-795P-201ENST00000516323 103 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 AC138749.4-201ENST00000563970 127 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 AC106800.4-201ENST00000614905 153 ntBASIC1.06□□□□□ -2.24
CDT1Q9H211 MIR377-201ENST00000362145 69 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 RNU6-766P-201ENST00000362478 107 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 Y_RNA.348-201ENST00000365403 103 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 MIR216A-201ENST00000385063 110 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 Y_RNA.588-201ENST00000391254 102 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 SNORD111-201ENST00000408139 94 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.05□□□□□ -2.24
CDT1Q9H211 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 AC012531.4-201ENST00000616509 177 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 AP001318.4-201ENST00000616637 121 ntBASIC1.05□□□□□ -2.24
CDT1Q9H211 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms