Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 PSMC1P5-201ENST00000512850 177 ntBASIC0.97□□□□□ -2.25
NUP88Q99567 RNU6-1234P-201ENST00000516877 103 ntBASIC0.97□□□□□ -2.25
NUP88Q99567 AL359881.1-201ENST00000602916 267 ntBASIC0.97□□□□□ -2.25
NUP88Q99567 AC008608.1-201ENST00000603910 127 ntBASIC0.97□□□□□ -2.25
NUP88Q99567 RNA5SP133-201ENST00000363368 119 ntBASIC0.96□□□□□ -2.26
NUP88Q99567 Y_RNA.205-201ENST00000364128 113 ntBASIC0.96□□□□□ -2.26
NUP88Q99567 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
NUP88Q99567 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
NUP88Q99567 RNU7-107P-201ENST00000459121 61 ntBASIC0.96□□□□□ -2.26
NUP88Q99567 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.96□□□□□ -2.26
NUP88Q99567 MIR6082-201ENST00000613604 109 ntBASIC0.96□□□□□ -2.26
NUP88Q99567 AL157777.2-201ENST00000258070 137 ntBASIC0.95□□□□□ -2.26
NUP88Q99567 Y_RNA.346-201ENST00000365385 112 ntBASIC0.95□□□□□ -2.26
NUP88Q99567 RNU6-80P-201ENST00000384195 107 ntBASIC0.95□□□□□ -2.26
NUP88Q99567 RNU6-616P-201ENST00000384353 107 ntBASIC0.95□□□□□ -2.26
NUP88Q99567 MIR1270-201ENST00000459320 83 ntBASIC0.95□□□□□ -2.26
NUP88Q99567 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
NUP88Q99567 SNORA25.16-201ENST00000516741 121 ntBASIC0.95□□□□□ -2.26
NUP88Q99567 MTND5P18-201ENST00000445624 1801 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 SNORD114-2-201ENST00000363953 78 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 Y_RNA.448-201ENST00000384185 108 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 AL603908.1-201ENST00000406098 201 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 AC244098.3-201ENST00000424803 96 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 RNU6-448P-201ENST00000517052 107 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 AC013244.2-201ENST00000603396 103 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 MIR8066-201ENST00000617280 78 ntBASIC0.94□□□□□ -2.26
NUP88Q99567 RNA5SP117-201ENST00000365294 118 ntBASIC0.93□□□□□ -2.26
NUP88Q99567 SNORA36.2-201ENST00000384004 127 ntBASIC0.93□□□□□ -2.26
NUP88Q99567 MIR206-201ENST00000384872 86 ntBASIC0.93□□□□□ -2.26
NUP88Q99567 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
NUP88Q99567 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
NUP88Q99567 AC090897.1-201ENST00000580909 226 ntBASIC0.93□□□□□ -2.26
NUP88Q99567 Y_RNA.42-201ENST00000362660 108 ntBASIC0.92□□□□□ -2.26
NUP88Q99567 RNU4-58P-201ENST00000363192 141 ntBASIC0.92□□□□□ -2.26
NUP88Q99567 RNU6-865P-201ENST00000364772 107 ntBASIC0.92□□□□□ -2.26
NUP88Q99567 RNY1P4-201ENST00000384595 115 ntBASIC0.92□□□□□ -2.26
NUP88Q99567 MT-TI-201ENST00000387365 69 ntBASIC0.92□□□□□ -2.26
NUP88Q99567 RNU7-2P-201ENST00000516096 62 ntBASIC0.92□□□□□ -2.26
NUP88Q99567 Y_RNA.697-201ENST00000516776 113 ntBASIC0.92□□□□□ -2.26
NUP88Q99567 Y_RNA.71-201ENST00000362892 104 ntBASIC0.91□□□□□ -2.26
NUP88Q99567 Y_RNA.525-201ENST00000384570 113 ntBASIC0.91□□□□□ -2.26
NUP88Q99567 RNU6-1321P-201ENST00000390905 107 ntBASIC0.91□□□□□ -2.26
NUP88Q99567 AC096949.1-201ENST00000412047 152 ntBASIC0.91□□□□□ -2.26
NUP88Q99567 RNU6-1194P-201ENST00000516208 104 ntBASIC0.91□□□□□ -2.26
NUP88Q99567 RNU6-531P-201ENST00000516694 104 ntBASIC0.91□□□□□ -2.26
NUP88Q99567 RN7SL793P-201ENST00000583259 296 ntBASIC0.91□□□□□ -2.26
NUP88Q99567 MIR101-2-201ENST00000362195 79 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 Y_RNA.218-201ENST00000364218 104 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 Y_RNA.630-201ENST00000411370 108 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 AC004941.2-201ENST00000427009 228 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 RNU7-48P-201ENST00000458875 63 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 RNU6-351P-201ENST00000516097 100 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 RNU6-765P-201ENST00000516916 99 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 AC087741.2-201ENST00000619415 172 ntBASIC0.9□□□□□ -2.27
NUP88Q99567 Y_RNA.119-201ENST00000363301 96 ntBASIC0.89□□□□□ -2.27
NUP88Q99567 RNY4P6-201ENST00000363667 96 ntBASIC0.89□□□□□ -2.27
NUP88Q99567 MIR548D2-201ENST00000384955 97 ntBASIC0.89□□□□□ -2.27
NUP88Q99567 RNU6-735P-201ENST00000410612 107 ntBASIC0.89□□□□□ -2.27
NUP88Q99567 AC138749.4-201ENST00000563970 127 ntBASIC0.89□□□□□ -2.27
NUP88Q99567 Y_RNA.98-201ENST00000363109 102 ntBASIC0.88□□□□□ -2.27
NUP88Q99567 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
NUP88Q99567 MIR216A-201ENST00000385063 110 ntBASIC0.88□□□□□ -2.27
NUP88Q99567 MIRLET7F2-201ENST00000385277 83 ntBASIC0.88□□□□□ -2.27
NUP88Q99567 AC002350.1-201ENST00000490759 375 ntBASIC0.88□□□□□ -2.27
NUP88Q99567 AP003327.1-201ENST00000529684 127 ntBASIC0.88□□□□□ -2.27
NUP88Q99567 SNORD115-35-201ENST00000365122 82 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 SNORD116-14-201ENST00000383894 92 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 SNORD116-17-201ENST00000383929 92 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 SNORD116-15-201ENST00000384445 92 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 SNORD116-19-201ENST00000384729 92 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 RNU6-469P-201ENST00000516253 101 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 Y_RNA.773-201ENST00000607168 90 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
NUP88Q99567 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
NUP88Q99567 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NUP88Q99567 SNORD115-19-201ENST00000363098 82 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 SNORD115-18-201ENST00000363293 82 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 SNORD115-17-201ENST00000364612 82 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 RNY1P2-201ENST00000364820 117 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 RNU6-535P-201ENST00000384722 107 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
NUP88Q99567 RNU6-1333P-201ENST00000516162 93 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.86□□□□□ -2.27
NUP88Q99567 MTND5P34-201ENST00000568888 325 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 MIR4500-201ENST00000579472 76 ntBASIC0.86□□□□□ -2.27
NUP88Q99567 Y_RNA.328-201ENST00000365208 113 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 RNU4-45P-201ENST00000365469 141 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 RNU6-959P-201ENST00000384671 107 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 SNORD100-201ENST00000408573 76 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 Y_RNA.649-201ENST00000459077 103 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 RNU6-521P-201ENST00000516663 105 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 AC138907.6-201ENST00000568401 126 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 AP001362.1-201ENST00000625165 124 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 MIR1255B1-201ENST00000636325 63 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 U6.95-201ENST00000636931 70 ntBASIC0.85□□□□□ -2.27
NUP88Q99567 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
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