Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RNU6-949P-201ENST00000384040 107 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 RNA5SP225-201ENST00000410874 135 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 SPINT5P-201ENST00000448174 155 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 snoU13.2-201ENST00000459201 104 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 RNU7-171P-201ENST00000459581 62 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 AC079140.2-201ENST00000506193 142 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 RNA5SP395-201ENST00000516567 118 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 MIR4781-201ENST00000585250 76 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 AL357312.1-201ENST00000603879 298 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 AC020891.4-201ENST00000605745 93 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 AC012676.2-201ENST00000619258 186 ntBASIC1.37□□□□□ -2.19
ZNF48Q96MX3 MIR302D-201ENST00000362275 68 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 RNU6-787P-201ENST00000384032 107 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 SNORD38.2-201ENST00000384470 69 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 MIR563-201ENST00000385080 79 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 AC027119.1-201ENST00000440877 241 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 snoU13.25-201ENST00000458945 104 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 AC133485.1-201ENST00000567176 124 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.36□□□□□ -2.19
ZNF48Q96MX3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
ZNF48Q96MX3 HSBP1P2-201ENST00000299671 229 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 SNORA25.3-201ENST00000363205 127 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 RNY1P2-201ENST00000364820 117 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 MIR588-201ENST00000384900 83 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 MIR1255A-201ENST00000408338 113 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 RNU6-613P-201ENST00000410412 108 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 Y_RNA.609-201ENST00000410669 89 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 MTND5P40-201ENST00000559945 246 ntBASIC1.35□□□□□ -2.19
ZNF48Q96MX3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ZNF48Q96MX3 RNU6-633P-201ENST00000362612 103 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 RNU6-509P-201ENST00000363519 107 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 RNA5SP363-201ENST00000365072 115 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 SNORA2B-201ENST00000384583 137 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 AL513043.2-201ENST00000573941 143 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 MIR4666B-201ENST00000578142 81 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 MIR4264-201ENST00000583520 66 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 MIR6740-201ENST00000618268 113 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 AC006160.2-201ENST00000637708 154 ntBASIC1.34□□□□□ -2.19
ZNF48Q96MX3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.2
ZNF48Q96MX3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 RNU6-396P-201ENST00000365369 105 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 MIR181B2-201ENST00000385004 89 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 AP003716.2-201ENST00000528260 108 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 AC138749.4-201ENST00000563970 127 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 AC025521.1-201ENST00000621624 286 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 MIR548BB-201ENST00000626714 66 ntBASIC1.33□□□□□ -2.2
ZNF48Q96MX3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
ZNF48Q96MX3 MIR30D-201ENST00000362283 70 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 SNORD33-201ENST00000362761 85 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 MT-TN-201ENST00000387400 73 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ZNF48Q96MX3 AL161932.1-201ENST00000437408 146 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 AC090897.1-201ENST00000580909 226 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 SNORA4-201ENST00000584302 138 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 AL359821.1-201ENST00000605519 182 ntBASIC1.32□□□□□ -2.2
ZNF48Q96MX3 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 RNA5SP133-201ENST00000363368 119 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 RNU6-1125P-201ENST00000363601 107 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 SNORD115-27-201ENST00000364430 82 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.437-201ENST00000384113 113 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 RNU6-480P-201ENST00000384332 107 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.31□□□□□ -2.2
ZNF48Q96MX3 SNRPGP12-201ENST00000449481 213 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 MIR2115-201ENST00000516657 100 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 AP000753.3-201ENST00000604083 169 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.31□□□□□ -2.2
ZNF48Q96MX3 RNU1-42P-201ENST00000364033 160 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.313-201ENST00000365095 103 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 RNU6-279P-201ENST00000391297 101 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 MIR1185-1-201ENST00000408598 86 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 RNU7-62P-201ENST00000458856 62 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 AL133373.1-201ENST00000497098 94 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 TRMT112P2-201ENST00000512910 132 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 AL512598.1-201ENST00000610158 273 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 uc_338.6-201ENST00000613544 171 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 MIR6516-201ENST00000630554 81 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 U6.109-201ENST00000636749 87 ntBASIC1.3□□□□□ -2.2
ZNF48Q96MX3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
ZNF48Q96MX3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ZNF48Q96MX3 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 329.9 ms