Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR6082-201ENST00000613604 109 ntBASIC1.93□□□□□ -2.1
CALR3Q96L12 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CALR3Q96L12 RNU6-997P-201ENST00000384725 107 ntBASIC1.92□□□□□ -2.1
CALR3Q96L12 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
CALR3Q96L12 MIR4676-201ENST00000583078 72 ntBASIC1.92□□□□□ -2.1
CALR3Q96L12 Y_RNA.13-201ENST00000362403 112 ntBASIC1.91□□□□□ -2.1
CALR3Q96L12 Y_RNA.190-201ENST00000363964 101 ntBASIC1.91□□□□□ -2.1
CALR3Q96L12 MIR181B2-201ENST00000385004 89 ntBASIC1.91□□□□□ -2.1
CALR3Q96L12 AC002429.1-201ENST00000437672 148 ntBASIC1.91□□□□□ -2.1
CALR3Q96L12 RNU6-765P-201ENST00000516916 99 ntBASIC1.91□□□□□ -2.1
CALR3Q96L12 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.91□□□□□ -2.1
CALR3Q96L12 RNA5SP363-201ENST00000365072 115 ntBASIC1.9□□□□□ -2.11
CALR3Q96L12 MIR634-201ENST00000385208 97 ntBASIC1.9□□□□□ -2.11
CALR3Q96L12 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CALR3Q96L12 RNU7-156P-201ENST00000517214 74 ntBASIC1.9□□□□□ -2.11
CALR3Q96L12 MIR4781-201ENST00000585250 76 ntBASIC1.9□□□□□ -2.11
CALR3Q96L12 MIR8066-201ENST00000617280 78 ntBASIC1.9□□□□□ -2.11
CALR3Q96L12 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CALR3Q96L12 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CALR3Q96L12 MIR101-2-201ENST00000362195 79 ntBASIC1.89□□□□□ -2.11
CALR3Q96L12 Y_RNA.57-201ENST00000362806 113 ntBASIC1.89□□□□□ -2.11
CALR3Q96L12 RNU6-1134P-201ENST00000365156 101 ntBASIC1.89□□□□□ -2.11
CALR3Q96L12 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.89□□□□□ -2.11
CALR3Q96L12 AC067940.1-201ENST00000458411 300 ntBASIC1.89□□□□□ -2.11
CALR3Q96L12 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CALR3Q96L12 MIR1-1-201ENST00000362147 71 ntBASIC1.88□□□□□ -2.11
CALR3Q96L12 RNU6-364P-201ENST00000384387 107 ntBASIC1.88□□□□□ -2.11
CALR3Q96L12 MIR938-201ENST00000401216 83 ntBASIC1.88□□□□□ -2.11
CALR3Q96L12 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
CALR3Q96L12 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.88□□□□□ -2.11
CALR3Q96L12 AC013244.2-201ENST00000603396 103 ntBASIC1.88□□□□□ -2.11
CALR3Q96L12 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
CALR3Q96L12 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CALR3Q96L12 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CALR3Q96L12 RNU6-369P-201ENST00000362515 102 ntBASIC1.87□□□□□ -2.11
CALR3Q96L12 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CALR3Q96L12 MIR100-201ENST00000385259 80 ntBASIC1.87□□□□□ -2.11
CALR3Q96L12 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.87□□□□□ -2.11
CALR3Q96L12 RNU6-977P-201ENST00000516411 103 ntBASIC1.87□□□□□ -2.11
CALR3Q96L12 AL513043.2-201ENST00000573941 143 ntBASIC1.87□□□□□ -2.11
CALR3Q96L12 SNORD92-201ENST00000585078 85 ntBASIC1.87□□□□□ -2.11
CALR3Q96L12 Y_RNA.42-201ENST00000362660 108 ntBASIC1.86□□□□□ -2.11
CALR3Q96L12 SNORD26-201ENST00000384147 75 ntBASIC1.86□□□□□ -2.11
CALR3Q96L12 AC025521.1-201ENST00000621624 286 ntBASIC1.86□□□□□ -2.11
CALR3Q96L12 AC027335.2-201ENST00000624030 375 ntBASIC1.86□□□□□ -2.11
CALR3Q96L12 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CALR3Q96L12 SNORD73B-201ENST00000364394 72 ntBASIC1.85□□□□□ -2.11
CALR3Q96L12 MIR4804-201ENST00000581683 73 ntBASIC1.85□□□□□ -2.11
CALR3Q96L12 MIR4435-1-201ENST00000582552 80 ntBASIC1.85□□□□□ -2.11
CALR3Q96L12 RNU7-10P-201ENST00000607194 63 ntBASIC1.85□□□□□ -2.11
CALR3Q96L12 SNORD100-201ENST00000408573 76 ntBASIC1.84□□□□□ -2.11
CALR3Q96L12 MIR1302-4-201ENST00000408701 150 ntBASIC1.84□□□□□ -2.11
CALR3Q96L12 RNA5SP508-201ENST00000411327 119 ntBASIC1.84□□□□□ -2.11
CALR3Q96L12 MIR4255-201ENST00000579351 72 ntBASIC1.84□□□□□ -2.11
CALR3Q96L12 SNORD116-22-201ENST00000384430 92 ntBASIC1.83□□□□□ -2.12
CALR3Q96L12 MIR1827-201ENST00000408549 66 ntBASIC1.83□□□□□ -2.12
CALR3Q96L12 MIR4648-201ENST00000580107 72 ntBASIC1.83□□□□□ -2.12
CALR3Q96L12 MIR548H5-201ENST00000580314 60 ntBASIC1.83□□□□□ -2.12
CALR3Q96L12 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CALR3Q96L12 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CALR3Q96L12 Y_RNA.56-201ENST00000362798 112 ntBASIC1.82□□□□□ -2.12
CALR3Q96L12 MIR635-201ENST00000384830 98 ntBASIC1.82□□□□□ -2.12
CALR3Q96L12 RNU7-102P-201ENST00000458948 62 ntBASIC1.82□□□□□ -2.12
CALR3Q96L12 AL645939.4-201ENST00000604495 135 ntBASIC1.82□□□□□ -2.12
CALR3Q96L12 MIR19B1-201ENST00000384829 87 ntBASIC1.81□□□□□ -2.12
CALR3Q96L12 U8.13-201ENST00000390842 128 ntBASIC1.81□□□□□ -2.12
CALR3Q96L12 RNU7-56P-201ENST00000458744 62 ntBASIC1.81□□□□□ -2.12
CALR3Q96L12 RNU1-41P-201ENST00000516161 162 ntBASIC1.81□□□□□ -2.12
CALR3Q96L12 SNORA72.7-201ENST00000516349 94 ntBASIC1.81□□□□□ -2.12
CALR3Q96L12 RNU1-48P-201ENST00000516400 162 ntBASIC1.81□□□□□ -2.12
CALR3Q96L12 Y_RNA.697-201ENST00000516776 113 ntBASIC1.81□□□□□ -2.12
CALR3Q96L12 Y_RNA.17-201ENST00000362433 111 ntBASIC1.8□□□□□ -2.12
CALR3Q96L12 MIR450A2-201ENST00000385022 100 ntBASIC1.8□□□□□ -2.12
CALR3Q96L12 MIR9-3-201ENST00000385084 90 ntBASIC1.8□□□□□ -2.12
CALR3Q96L12 RNU1-119P-201ENST00000391122 165 ntBASIC1.8□□□□□ -2.12
CALR3Q96L12 RNU6-1254P-201ENST00000391266 104 ntBASIC1.8□□□□□ -2.12
CALR3Q96L12 RPS29P23-201ENST00000458635 123 ntBASIC1.8□□□□□ -2.12
CALR3Q96L12 RNU6-762P-201ENST00000517107 102 ntBASIC1.8□□□□□ -2.12
CALR3Q96L12 Y_RNA.536-201ENST00000384621 113 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 MIR520F-201ENST00000384824 87 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 MIR516A2-201ENST00000384888 90 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 MIR516A1-201ENST00000385033 90 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 MIR23A-201ENST00000385245 73 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 SNORD63B-201ENST00000411005 70 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 FABP5P4-201ENST00000437203 171 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 AC019288.1-201ENST00000557918 224 ntBASIC1.79□□□□□ -2.12
CALR3Q96L12 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CALR3Q96L12 MIR449A-201ENST00000362113 91 ntBASIC1.78□□□□□ -2.12
CALR3Q96L12 AP003327.1-201ENST00000529684 127 ntBASIC1.78□□□□□ -2.12
CALR3Q96L12 AL136317.1-201ENST00000612653 226 ntBASIC1.78□□□□□ -2.12
CALR3Q96L12 RNU6-243P-201ENST00000391140 107 ntBASIC1.77□□□□□ -2.13
CALR3Q96L12 Y_RNA.593-201ENST00000410292 98 ntBASIC1.77□□□□□ -2.13
CALR3Q96L12 Y_RNA.609-201ENST00000410669 89 ntBASIC1.77□□□□□ -2.13
CALR3Q96L12 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
CALR3Q96L12 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.77□□□□□ -2.13
CALR3Q96L12 SNORD36A-201ENST00000362874 73 ntBASIC1.76□□□□□ -2.13
CALR3Q96L12 MIR200A-201ENST00000384875 90 ntBASIC1.76□□□□□ -2.13
CALR3Q96L12 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
CALR3Q96L12 RNU7-106P-201ENST00000459514 67 ntBASIC1.76□□□□□ -2.13
CALR3Q96L12 TRAJ51-201ENST00000504127 63 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms