Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AP001362.1-201ENST00000625165 124 ntBASIC1.39□□□□□ -2.19
PDLIM2Q96JY6 RNU6-1134P-201ENST00000365156 101 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 RNU6-813P-201ENST00000384691 107 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 RNU6-972P-201ENST00000391208 107 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 MIR548G-201ENST00000408442 89 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 RNA5SP95-201ENST00000410319 137 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 RNU6-613P-201ENST00000410412 108 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 AC026421.1-201ENST00000519101 163 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 RNU6-90P-201ENST00000606352 106 ntBASIC1.38□□□□□ -2.19
PDLIM2Q96JY6 MIR30D-201ENST00000362283 70 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 RNU6-1163P-201ENST00000364516 107 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 MIR1285-1-201ENST00000408593 84 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 RNU6-887P-201ENST00000410660 100 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 AC245517.4-201ENST00000448601 281 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 RNU6-762P-201ENST00000517107 102 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 MTND5P40-201ENST00000559945 246 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
PDLIM2Q96JY6 Y_RNA.567-201ENST00000384736 106 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 U8.15-201ENST00000390947 134 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 MIR1302-4-201ENST00000408701 150 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 uc_338.6-201ENST00000613544 171 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 AC012676.2-201ENST00000619258 186 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
PDLIM2Q96JY6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 MIR377-201ENST00000362145 69 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 Y_RNA.190-201ENST00000363964 101 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 RNY1P2-201ENST00000364820 117 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 AC048334.1-201ENST00000477975 159 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 MIR4422-201ENST00000581938 83 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 AC103810.7-201ENST00000607821 91 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 U6.109-201ENST00000636749 87 ntBASIC1.35□□□□□ -2.19
PDLIM2Q96JY6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 MIR378A-201ENST00000362177 66 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 MT-TF-201ENST00000387314 71 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 SNORA26.2-201ENST00000390922 122 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 AL591704.2-201ENST00000421658 181 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 AC138749.4-201ENST00000563970 127 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 MIR4500-201ENST00000579472 76 ntBASIC1.34□□□□□ -2.19
PDLIM2Q96JY6 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 RNA5SP133-201ENST00000363368 119 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 RNU6-580P-201ENST00000365159 107 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 SNORD58A-201ENST00000383875 65 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 SNORA2B-201ENST00000384583 137 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 RNY4P29-201ENST00000410801 97 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 AC090897.1-201ENST00000580909 226 ntBASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PDLIM2Q96JY6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 Y_RNA.119-201ENST00000363301 96 ntBASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 Y_RNA.173-201ENST00000363776 113 ntBASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 MIR450A2-201ENST00000385022 100 ntBASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 MIR4498-201ENST00000577599 66 ntBASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 AC062037.1-201ENST00000605302 128 ntBASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PDLIM2Q96JY6 Y_RNA.17-201ENST00000362433 111 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 RNU6-1244P-201ENST00000363614 108 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 SNORD116-10-201ENST00000363791 102 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 Y_RNA.388-201ENST00000383919 113 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 SNORD93-201ENST00000408813 74 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 AP1B1P2-201ENST00000416196 106 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 MIR18B-201ENST00000454574 71 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 RNU6-902P-201ENST00000517212 91 ntBASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PDLIM2Q96JY6 HSBP1P2-201ENST00000299671 229 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 MIR494-201ENST00000349529 81 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 RNU6-1125P-201ENST00000363601 107 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 RNU6-480P-201ENST00000384332 107 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 SNORA75.2-201ENST00000391138 150 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 SNORA75.3-201ENST00000391231 150 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.3□□□□□ -2.2
PDLIM2Q96JY6 RNY1P10-201ENST00000363268 113 ntBASIC1.29□□□□□ -2.2
PDLIM2Q96JY6 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
PDLIM2Q96JY6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.29□□□□□ -2.2
PDLIM2Q96JY6 MIR181B2-201ENST00000385004 89 ntBASIC1.29□□□□□ -2.2
PDLIM2Q96JY6 Y_RNA.593-201ENST00000410292 98 ntBASIC1.29□□□□□ -2.2
PDLIM2Q96JY6 snoU13.21-201ENST00000459368 105 ntBASIC1.29□□□□□ -2.2
PDLIM2Q96JY6 MIR4491-201ENST00000581087 68 ntBASIC1.29□□□□□ -2.2
PDLIM2Q96JY6 AC103810.9-201ENST00000606688 112 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms