Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 RNU4-58P-201ENST00000363192 141 ntBASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 SNORA72.6-201ENST00000384520 129 ntBASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 MIR764-201ENST00000390811 85 ntBASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 MTATP8P2-201ENST00000435212 202 ntBASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 AC002429.1-201ENST00000437672 148 ntBASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 MIR4500-201ENST00000579472 76 ntBASIC1.35□□□□□ -2.19
FOXRED1Q96CU9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 Y_RNA.247-201ENST00000364500 92 ntBASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 SNORA67.5-201ENST00000391036 107 ntBASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 RNU6-795P-201ENST00000516323 103 ntBASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 AC090897.1-201ENST00000580909 226 ntBASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 AL353997.5-201ENST00000618886 171 ntBASIC1.34□□□□□ -2.19
FOXRED1Q96CU9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
FOXRED1Q96CU9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 HSBP1P2-201ENST00000299671 229 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 MIR1-1-201ENST00000362147 71 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 MIR125B2-201ENST00000385128 89 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 Y_RNA.588-201ENST00000391254 102 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 RNU7-40P-201ENST00000516397 64 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 RNA5SP170-201ENST00000517150 101 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 MIR4781-201ENST00000585250 76 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 BX248123.2-201ENST00000606318 124 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 AC012531.4-201ENST00000616509 177 ntBASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
FOXRED1Q96CU9 Y_RNA.466-201ENST00000384294 113 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 RNU6-905P-201ENST00000384434 107 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 Y_RNA.567-201ENST00000384736 106 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 MIR100-201ENST00000385259 80 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 AC109327.2-201ENST00000448339 378 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 Y_RNA.705-201ENST00000516862 110 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 AC027335.2-201ENST00000624030 375 ntBASIC1.32□□□□□ -2.2
FOXRED1Q96CU9 SNORA25.8-201ENST00000364831 128 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 RNU6-364P-201ENST00000384387 107 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 MIR938-201ENST00000401216 83 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 RNU6-977P-201ENST00000516411 103 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 RNU6-531P-201ENST00000516694 104 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 SNORA25.16-201ENST00000516741 121 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 MIR4676-201ENST00000583078 72 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 AC020891.4-201ENST00000605745 93 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 AC091304.10-201ENST00000641554 121 ntBASIC1.31□□□□□ -2.2
FOXRED1Q96CU9 RNU6-640P-201ENST00000363693 105 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 RNU6-813P-201ENST00000384691 107 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 RNU6-972P-201ENST00000391208 107 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 RNY4P30-201ENST00000410216 95 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 FABP5P4-201ENST00000437203 171 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 SNORD13-201ENST00000459299 104 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 RNU6-237P-201ENST00000515985 71 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 RNU6-765P-201ENST00000516916 99 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 RNU7-156P-201ENST00000517214 74 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 MIR4777-201ENST00000583710 86 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 MIR4769-201ENST00000584126 77 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 AL136317.1-201ENST00000612653 226 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 MIR6082-201ENST00000613604 109 ntBASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
FOXRED1Q96CU9 MIR101-2-201ENST00000362195 79 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 RNU1-17P-201ENST00000363022 152 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 RNU6-1125P-201ENST00000363601 107 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 Y_RNA.173-201ENST00000363776 113 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 RNU6-1163P-201ENST00000364516 107 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 RNU6-571P-201ENST00000384128 107 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 RNU6-480P-201ENST00000384332 107 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 AC015818.7-201ENST00000428754 109 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 AC087499.7-201ENST00000441958 109 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 RNU6-86P-201ENST00000606534 107 ntBASIC1.29□□□□□ -2.2
FOXRED1Q96CU9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 Y_RNA.220-201ENST00000364244 109 ntBASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 MIR19B1-201ENST00000384829 87 ntBASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 SNORA67.6-201ENST00000391093 99 ntBASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 RNU6-644P-201ENST00000391155 98 ntBASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 RNU7-61P-201ENST00000515897 61 ntBASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 MIR7974-201ENST00000615835 79 ntBASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
FOXRED1Q96CU9 RNU6-1298P-201ENST00000362456 101 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 Y_RNA.467-201ENST00000384297 102 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 MIR200A-201ENST00000384875 90 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 MIR1323-201ENST00000408090 73 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 MIR1827-201ENST00000408549 66 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 RNU6-887P-201ENST00000410660 100 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 SNRPGP12-201ENST00000449481 213 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
FOXRED1Q96CU9 RNU7-10P-201ENST00000607194 63 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms