Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MIR4422-201ENST00000581938 83 ntBASIC1.94□□□□□ -2.1
DDX1Q92499 AL357312.1-201ENST00000603879 298 ntBASIC1.94□□□□□ -2.1
DDX1Q92499 AL512598.1-201ENST00000610158 273 ntBASIC1.94□□□□□ -2.1
DDX1Q92499 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 Y_RNA.316-201ENST00000365118 111 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 MIR520C-201ENST00000385005 87 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-447P-201ENST00000410293 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-1118P-201ENST00000410382 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-1076P-201ENST00000410397 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-355P-201ENST00000410427 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-791P-201ENST00000410467 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-705P-201ENST00000410601 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-1100P-201ENST00000410691 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-860P-201ENST00000410860 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-1217P-201ENST00000411276 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNU6-785P-201ENST00000411324 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 AL161932.1-201ENST00000437408 146 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RPS29P28-201ENST00000446439 141 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 BX248123.2-201ENST00000606318 124 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 GHRLOS.1-201ENST00000610995 70 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 U6.90-201ENST00000614007 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 U6.70-201ENST00000620287 104 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
DDX1Q92499 RNY1P13-201ENST00000365030 105 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 RNU6-524P-201ENST00000384270 107 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 SNORA2B-201ENST00000384583 137 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 RNU4-62P-201ENST00000410125 130 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 AC019176.1-201ENST00000518519 225 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 AL513043.2-201ENST00000573941 143 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 AC105081.1-201ENST00000617727 106 ntBASIC1.92□□□□□ -2.1
DDX1Q92499 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX1Q92499 Y_RNA.98-201ENST00000363109 102 ntBASIC1.91□□□□□ -2.1
DDX1Q92499 RNU6-776P-201ENST00000364403 104 ntBASIC1.91□□□□□ -2.1
DDX1Q92499 RNU6-865P-201ENST00000364772 107 ntBASIC1.91□□□□□ -2.1
DDX1Q92499 RNU6-1022P-201ENST00000365049 104 ntBASIC1.91□□□□□ -2.1
DDX1Q92499 AC027119.1-201ENST00000440877 241 ntBASIC1.91□□□□□ -2.1
DDX1Q92499 RNU7-48P-201ENST00000458875 63 ntBASIC1.91□□□□□ -2.1
DDX1Q92499 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
DDX1Q92499 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
DDX1Q92499 HSBP1P2-201ENST00000299671 229 ntBASIC1.9□□□□□ -2.11
DDX1Q92499 RNA5SP133-201ENST00000363368 119 ntBASIC1.9□□□□□ -2.11
DDX1Q92499 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
DDX1Q92499 MIR1276-201ENST00000408707 83 ntBASIC1.9□□□□□ -2.11
DDX1Q92499 AC012676.2-201ENST00000619258 186 ntBASIC1.9□□□□□ -2.11
DDX1Q92499 MIR4662A-201ENST00000637499 67 ntBASIC1.9□□□□□ -2.11
DDX1Q92499 MIR181B2-201ENST00000385004 89 ntBASIC1.89□□□□□ -2.11
DDX1Q92499 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
DDX1Q92499 RPL30P7-201ENST00000479312 323 ntBASIC1.89□□□□□ -2.11
DDX1Q92499 RNA5SP220-201ENST00000516298 104 ntBASIC1.89□□□□□ -2.11
DDX1Q92499 RNA5SP480-201ENST00000516840 109 ntBASIC1.89□□□□□ -2.11
DDX1Q92499 AC140658.3-201ENST00000567603 271 ntBASIC1.89□□□□□ -2.11
DDX1Q92499 AC012493.3-201ENST00000604494 112 ntBASIC1.89□□□□□ -2.11
DDX1Q92499 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
DDX1Q92499 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
DDX1Q92499 Y_RNA.540-201ENST00000384638 111 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 SNORD41-201ENST00000386967 70 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 AC244023.1-201ENST00000426884 112 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 AC087499.7-201ENST00000441958 109 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 SPINT5P-201ENST00000448174 155 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 AC139453.2-201ENST00000487255 133 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 RNU7-41P-201ENST00000515917 61 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 RNU6-947P-201ENST00000516264 106 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 RNU6-250P-201ENST00000516958 103 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 AC141846.1-201ENST00000568348 142 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 AL078603.1-201ENST00000603824 313 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 AC242498.1-201ENST00000604134 111 ntBASIC1.88□□□□□ -2.11
DDX1Q92499 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
DDX1Q92499 RNU6-392P-201ENST00000364926 101 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 Y_RNA.327-201ENST00000365201 102 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 AC093729.1-201ENST00000513074 128 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 CYP3A52P-201ENST00000563326 91 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 MIR4712-201ENST00000583750 82 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.87□□□□□ -2.11
DDX1Q92499 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 AP001362.1-201ENST00000625165 124 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 MIR4251-201ENST00000635819 61 ntBASIC1.87□□□□□ -2.11
DDX1Q92499 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
DDX1Q92499 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
DDX1Q92499 SNORD38B-201ENST00000384690 67 ntBASIC1.86□□□□□ -2.11
DDX1Q92499 MIR519C-201ENST00000385053 87 ntBASIC1.86□□□□□ -2.11
DDX1Q92499 MIR1302-7-201ENST00000408841 72 ntBASIC1.86□□□□□ -2.11
DDX1Q92499 MIR4255-201ENST00000579351 72 ntBASIC1.86□□□□□ -2.11
DDX1Q92499 PRELID3BP2-201ENST00000605362 201 ntBASIC1.86□□□□□ -2.11
DDX1Q92499 SNORD38B-202ENST00000625943 69 ntBASIC1.86□□□□□ -2.11
DDX1Q92499 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
DDX1Q92499 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.85□□□□□ -2.11
DDX1Q92499 RNU6-1229P-201ENST00000364295 107 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 RNY1P2-201ENST00000364820 117 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 RNU6-480P-201ENST00000384332 107 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 SNORD38.2-201ENST00000384470 69 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 AC009474.2-201ENST00000451383 136 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 SNORD111.1-201ENST00000516421 86 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 MIR3664-201ENST00000579074 99 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 AL662814.1-201ENST00000617364 121 ntBASIC1.85□□□□□ -2.11
DDX1Q92499 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX1Q92499 RNU6-949P-201ENST00000384040 107 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms