Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR2052-201ENST00000636055 55 ntBASIC1.66□□□□□ -2.14
SYNE4Q8N205 Y_RNA.95-201ENST00000363079 95 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 SNORD1A-201ENST00000364968 72 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 Y_RNA.448-201ENST00000384185 108 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 AC109327.2-201ENST00000448339 378 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 RN7SKP12-201ENST00000516275 143 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 RNU6-1018P-201ENST00000516577 106 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 RNU7-137P-201ENST00000516788 62 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 CYP3A52P-201ENST00000563326 91 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.65□□□□□ -2.15
SYNE4Q8N205 uc_338.6-201ENST00000613544 171 ntBASIC1.65□□□□□ -2.15
SYNE4Q8N205 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SYNE4Q8N205 Y_RNA.17-201ENST00000362433 111 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 Y_RNA.30-201ENST00000362572 97 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 RNY1P13-201ENST00000365030 105 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 RNU6-1134P-201ENST00000365156 101 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 RNU6-1067P-201ENST00000384752 107 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 AL451046.2-201ENST00000403074 277 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.64□□□□□ -2.15
SYNE4Q8N205 Y_RNA.10-201ENST00000362371 110 ntBASIC1.63□□□□□ -2.15
SYNE4Q8N205 RNU6-1163P-201ENST00000364516 107 ntBASIC1.63□□□□□ -2.15
SYNE4Q8N205 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE4Q8N205 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SYNE4Q8N205 Y_RNA.73-201ENST00000362910 113 ntBASIC1.62□□□□□ -2.15
SYNE4Q8N205 SNORD45B-201ENST00000364617 72 ntBASIC1.62□□□□□ -2.15
SYNE4Q8N205 SNORA40.6-201ENST00000391153 128 ntBASIC1.62□□□□□ -2.15
SYNE4Q8N205 RNU6-267P-201ENST00000516714 103 ntBASIC1.62□□□□□ -2.15
SYNE4Q8N205 MIR1245B-201ENST00000636115 69 ntBASIC1.62□□□□□ -2.15
SYNE4Q8N205 RNU6-322P-201ENST00000516010 103 ntBASIC1.61□□□□□ -2.15
SYNE4Q8N205 AC141846.1-201ENST00000568348 142 ntBASIC1.61□□□□□ -2.15
SYNE4Q8N205 RNU6-86P-201ENST00000606534 107 ntBASIC1.61□□□□□ -2.15
SYNE4Q8N205 MIR6740-201ENST00000618268 113 ntBASIC1.61□□□□□ -2.15
SYNE4Q8N205 AC027119.1-201ENST00000440877 241 ntBASIC1.6□□□□□ -2.15
SYNE4Q8N205 AC079140.2-201ENST00000506193 142 ntBASIC1.6□□□□□ -2.15
SYNE4Q8N205 AC068338.1-201ENST00000565567 176 ntBASIC1.6□□□□□ -2.15
SYNE4Q8N205 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.6□□□□□ -2.15
SYNE4Q8N205 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
SYNE4Q8N205 MIR6767-201ENST00000637302 66 ntBASIC1.6□□□□□ -2.15
SYNE4Q8N205 SNORD38B-201ENST00000384690 67 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 MIR450A2-201ENST00000385022 100 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 U8.15-201ENST00000390947 134 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 RNA5SP95-201ENST00000410319 137 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 RPS27P16-201ENST00000425758 201 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 RNU6-947P-201ENST00000516264 106 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 AC103810.7-201ENST00000607821 91 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 AL662814.1-201ENST00000617364 121 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 SNORD38B-202ENST00000625943 69 ntBASIC1.59□□□□□ -2.15
SYNE4Q8N205 RNU6-654P-201ENST00000364373 107 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 RNU6-1152P-201ENST00000384576 107 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 RNU6-205P-201ENST00000390858 107 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 MIR1185-1-201ENST00000408598 86 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 RNU6-887P-201ENST00000410660 100 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 RNU6-402P-201ENST00000410678 103 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 AP003716.2-201ENST00000528260 108 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
SYNE4Q8N205 SNORD114-10-201ENST00000363409 72 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 RNA5SP48-201ENST00000363969 126 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 MIR934-201ENST00000401241 83 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.57□□□□□ -2.16
SYNE4Q8N205 RPS29P28-201ENST00000446439 141 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 RNU7-48P-201ENST00000458875 63 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 snoU13.2-201ENST00000459201 104 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 Y_RNA.705-201ENST00000516862 110 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.57□□□□□ -2.16
SYNE4Q8N205 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SYNE4Q8N205 SNORD33-201ENST00000362761 85 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 RNU6-1244P-201ENST00000363614 108 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 SNORD38.1-201ENST00000363863 68 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 RNU6-219P-201ENST00000364728 107 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 RNU6-865P-201ENST00000364772 107 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 RNU6-813P-201ENST00000384691 107 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 MIR588-201ENST00000384900 83 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 MIR563-201ENST00000385080 79 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 RNU6-165P-201ENST00000517170 99 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 MIR6516-201ENST00000630554 81 ntBASIC1.56□□□□□ -2.16
SYNE4Q8N205 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE4Q8N205 MIR30D-201ENST00000362283 70 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 SNORD58A-201ENST00000383875 65 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 RNY1P4-201ENST00000384595 115 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 MIR548G-201ENST00000408442 89 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 RNA5SP237-201ENST00000410414 113 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 AC022137.1-201ENST00000483735 151 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 AC096720.1-201ENST00000604441 183 ntBASIC1.55□□□□□ -2.16
SYNE4Q8N205 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SYNE4Q8N205 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE4Q8N205 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE4Q8N205 RNU6-949P-201ENST00000384040 107 ntBASIC1.54□□□□□ -2.16
SYNE4Q8N205 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SYNE4Q8N205 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
SYNE4Q8N205 AL512310.8-201ENST00000550183 120 ntBASIC1.54□□□□□ -2.16
SYNE4Q8N205 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE4Q8N205 RNU6-675P-201ENST00000384236 104 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms