Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXR1Q6PIV2 SNORD111.1-201ENST00000516421 86 ntBASIC2.41□□□□□ -2.02
FOXR1Q6PIV2 MIR337-201ENST00000362281 93 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 SNORA67.1-201ENST00000364749 141 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 RNU6-154P-201ENST00000384306 106 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 snoU13.15-201ENST00000459407 104 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 RNU6-237P-201ENST00000515985 71 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 RNU6-922P-201ENST00000516753 99 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 MIR4491-201ENST00000581087 68 ntBASIC2.4□□□□□ -2.03
FOXR1Q6PIV2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 Y_RNA.36-201ENST00000362602 112 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 RNA5SP456-201ENST00000364002 114 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 Y_RNA.371-201ENST00000365591 113 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 RNU6-360P-201ENST00000390944 104 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 MTND4LP19-201ENST00000403051 166 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 RNU6-717P-201ENST00000459076 104 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 MIR3140-201ENST00000583685 90 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 AL357312.1-201ENST00000603879 298 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 AC005520.4-201ENST00000604337 90 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
FOXR1Q6PIV2 Y_RNA.207-201ENST00000364142 106 ntBASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 RNU6-1051P-201ENST00000365471 102 ntBASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 RNU6-471P-201ENST00000383944 106 ntBASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 Y_RNA.588-201ENST00000391254 102 ntBASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 TRAJ51-201ENST00000504127 63 ntBASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 RNU6-322P-201ENST00000516010 103 ntBASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 MIR4648-201ENST00000580107 72 ntBASIC2.38□□□□□ -2.03
FOXR1Q6PIV2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 MIRLET7G-201ENST00000362280 84 ntBASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 RNA5SP48-201ENST00000363969 126 ntBASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 RNU6-291P-201ENST00000384720 107 ntBASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 RNU7-195P-201ENST00000458793 62 ntBASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 RNU7-62P-201ENST00000458856 62 ntBASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 RNU6-1194P-201ENST00000516208 104 ntBASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 MIR6873-201ENST00000622788 63 ntBASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
FOXR1Q6PIV2 RNU6-396P-201ENST00000365369 105 ntBASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 RNA5SP259-201ENST00000365541 109 ntBASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 RNU6-987P-201ENST00000384759 104 ntBASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 MIR942-201ENST00000401111 86 ntBASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 RNA5SP95-201ENST00000410319 137 ntBASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 RN7SKP223-201ENST00000410582 62 ntBASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.36□□□□□ -2.03
FOXR1Q6PIV2 RNU6-340P-201ENST00000364005 107 ntBASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 MIR1289-2-201ENST00000408360 111 ntBASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 RNU4-37P-201ENST00000410214 84 ntBASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 MIR6516-201ENST00000630554 81 ntBASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXR1Q6PIV2 Y_RNA.42-201ENST00000362660 108 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 RNU6-654P-201ENST00000364373 107 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 SNORD45A-201ENST00000384512 84 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 SNORD100-201ENST00000408573 76 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 AL161935.2-201ENST00000414627 60 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 RNU11-2P-201ENST00000516898 142 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 RNU2-19P-201ENST00000517288 84 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 MIR4264-201ENST00000583520 66 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 AC046143.2-201ENST00000609789 160 ntBASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.34□□□□□ -2.03
FOXR1Q6PIV2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
FOXR1Q6PIV2 RNU6-439P-201ENST00000384188 106 ntBASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 MIR513A1-201ENST00000385138 129 ntBASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 AC108210.2-201ENST00000503681 201 ntBASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 U1.36-201ENST00000620684 176 ntBASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
FOXR1Q6PIV2 RNU4-58P-201ENST00000363192 141 ntBASIC2.32□□□□□ -2.04
FOXR1Q6PIV2 RNU6-630P-201ENST00000391258 106 ntBASIC2.32□□□□□ -2.04
FOXR1Q6PIV2 SNORD93-201ENST00000408813 74 ntBASIC2.32□□□□□ -2.04
FOXR1Q6PIV2 AL591806.2-201ENST00000433122 173 ntBASIC2.32□□□□□ -2.04
FOXR1Q6PIV2 AC013244.2-201ENST00000603396 103 ntBASIC2.32□□□□□ -2.04
FOXR1Q6PIV2 TRDV1-202ENST00000621643 102 ntBASIC2.32□□□□□ -2.04
FOXR1Q6PIV2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 RNU6-403P-201ENST00000363163 104 ntBASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 Y_RNA.536-201ENST00000384621 113 ntBASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 AC092628.1-201ENST00000436250 252 ntBASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 RPL30P7-201ENST00000479312 323 ntBASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 MIR5089-201ENST00000580047 84 ntBASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 U6.100-201ENST00000636230 99 ntBASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.31□□□□□ -2.04
FOXR1Q6PIV2 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
FOXR1Q6PIV2 MT-TF-201ENST00000387314 71 ntBASIC2.3□□□□□ -2.04
FOXR1Q6PIV2 MIR1185-1-201ENST00000408598 86 ntBASIC2.3□□□□□ -2.04
FOXR1Q6PIV2 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms