Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 Y_RNA.437-201ENST00000384113 113 ntBASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 MIR563-201ENST00000385080 79 ntBASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 MT-TN-201ENST00000387400 73 ntBASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 AC244636.1-201ENST00000421152 228 ntBASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 RNU6-922P-201ENST00000516753 99 ntBASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 AL513043.2-201ENST00000573941 143 ntBASIC2.22□□□□□ -2.05
COL13A1Q5TAT6 RNA5SP276-201ENST00000362580 94 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 RNA5SP457-201ENST00000363657 124 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 RNU6-53P-201ENST00000365367 106 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 SNORA2B-201ENST00000384583 137 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 MIR588-201ENST00000384900 83 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 MIR181B2-201ENST00000385004 89 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 MIR9-3-201ENST00000385084 90 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 MIR2115-201ENST00000516657 100 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 MIR3192-201ENST00000584920 77 ntBASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
COL13A1Q5TAT6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 SNORA7.1-201ENST00000363750 139 ntBASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 RNU11-2P-201ENST00000516898 142 ntBASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 MIR4713-201ENST00000582691 75 ntBASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 AL096861.1-201ENST00000610899 123 ntBASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 MIR8074-201ENST00000615081 81 ntBASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
COL13A1Q5TAT6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 Y_RNA.168-201ENST00000363740 102 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 RNU1-93P-201ENST00000364704 169 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 MIR1302-7-201ENST00000408841 72 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 RNU6-613P-201ENST00000410412 108 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 AL137847.3-201ENST00000611521 109 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 MIR8066-201ENST00000617280 78 ntBASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
COL13A1Q5TAT6 RNU6-439P-201ENST00000384188 106 ntBASIC2.18□□□□□ -2.06
COL13A1Q5TAT6 RNU6-24P-201ENST00000384440 107 ntBASIC2.18□□□□□ -2.06
COL13A1Q5TAT6 MIR151B-201ENST00000584249 96 ntBASIC2.18□□□□□ -2.06
COL13A1Q5TAT6 Y_RNA.313-201ENST00000365095 103 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 MIR519C-201ENST00000385053 87 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 MT-TF-201ENST00000387314 71 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 SNRPGP12-201ENST00000449481 213 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 AL133373.1-201ENST00000497098 94 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 MIR6788-201ENST00000618842 66 ntBASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
COL13A1Q5TAT6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 MIR377-201ENST00000362145 69 ntBASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 RNA5SP133-201ENST00000363368 119 ntBASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 RNU6-571P-201ENST00000384128 107 ntBASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 MIR548J-201ENST00000408833 112 ntBASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 RNU6-857P-201ENST00000515893 110 ntBASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 AC138749.4-201ENST00000563970 127 ntBASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 AL157834.3-201ENST00000615543 103 ntBASIC2.16□□□□□ -2.06
COL13A1Q5TAT6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL13A1Q5TAT6 RNU1-42P-201ENST00000364033 160 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 Y_RNA.244-201ENST00000364484 109 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 RNU6-1165P-201ENST00000410119 107 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 AC019288.1-201ENST00000557918 224 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 AC090897.1-201ENST00000580909 226 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 AL645939.4-201ENST00000604495 135 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 MIR6740-201ENST00000618268 113 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 AC008163.1-202ENST00000636004 2889 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
COL13A1Q5TAT6 MIR30D-201ENST00000362283 70 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 SNORD115-37-201ENST00000363768 82 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 RNU6-519P-201ENST00000410590 108 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 RPL30P7-201ENST00000479312 323 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 AC093729.1-201ENST00000513074 128 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 AP003716.2-201ENST00000528260 108 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 MIR4500-201ENST00000579472 76 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL13A1Q5TAT6 SNORD33-201ENST00000362761 85 ntBASIC2.13□□□□□ -2.07
COL13A1Q5TAT6 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
COL13A1Q5TAT6 RNU7-62P-201ENST00000458856 62 ntBASIC2.13□□□□□ -2.07
COL13A1Q5TAT6 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
COL13A1Q5TAT6 AC103810.8-201ENST00000607347 118 ntBASIC2.13□□□□□ -2.07
COL13A1Q5TAT6 Y_RNA.57-201ENST00000362806 113 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 SNORA25.3-201ENST00000363205 127 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 AC098934.3-201ENST00000430450 190 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 SNORA44.1-201ENST00000517031 108 ntBASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.12□□□□□ -2.07
COL13A1Q5TAT6 AC020891.4-201ENST00000605745 93 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 296 ms