Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SNORA25.13-201ENST00000516395 103 ntBASIC2.03□□□□□ -2.08
SOX4Q06945 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
SOX4Q06945 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SOX4Q06945 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX4Q06945 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SOX4Q06945 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 MIR889-201ENST00000401280 79 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AC244636.1-201ENST00000421152 228 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 RNU7-85P-201ENST00000458851 63 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AC023790.1-201ENST00000482174 347 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 RNU6-237P-201ENST00000515985 71 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 uc_338.6-201ENST00000613544 171 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AC008163.1-202ENST00000636004 2889 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
SOX4Q06945 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SOX4Q06945 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SOX4Q06945 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
SOX4Q06945 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 AC245517.4-201ENST00000448601 281 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 Y_RNA.648-201ENST00000459455 110 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 RPL30P7-201ENST00000479312 323 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 AP003716.2-201ENST00000528260 108 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 MIR6516-201ENST00000630554 81 ntBASIC2.01□□□□□ -2.09
SOX4Q06945 MT-TF-201ENST00000387314 71 ntBASIC2□□□□□ -2.09
SOX4Q06945 MIR1185-1-201ENST00000408598 86 ntBASIC2□□□□□ -2.09
SOX4Q06945 AC073261.1-201ENST00000429409 121 ntBASIC2□□□□□ -2.09
SOX4Q06945 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
SOX4Q06945 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
SOX4Q06945 RNU11-2P-201ENST00000516898 142 ntBASIC2□□□□□ -2.09
SOX4Q06945 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
SOX4Q06945 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SOX4Q06945 RNU6-129P-201ENST00000391022 107 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 RNU6-548P-201ENST00000517083 115 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
SOX4Q06945 RNU6-315P-201ENST00000362666 107 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 RNA5SP264-201ENST00000363115 107 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 Y_RNA.508-201ENST00000384502 114 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 SNORA72.6-201ENST00000384520 129 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR516A2-201ENST00000384888 90 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR516A1-201ENST00000385033 90 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR676-201ENST00000390702 67 ntBASIC1.98□□□□□ -2.09
SOX4Q06945 MIR377-201ENST00000362145 69 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 MIR103A2-201ENST00000362154 78 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 SNORD36A-201ENST00000362874 73 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 RNU6-624P-201ENST00000363411 107 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 RNU6-654P-201ENST00000364373 107 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 snoU13.11-201ENST00000459219 104 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 AC005908.1-201ENST00000468701 347 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 MIR4491-201ENST00000581087 68 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 MIR8063-201ENST00000621930 81 ntBASIC1.97□□□□□ -2.09
SOX4Q06945 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
SOX4Q06945 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.96□□□□□ -2.1
SOX4Q06945 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SOX4Q06945 RNU1-17P-201ENST00000363022 152 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNU6-478P-201ENST00000363904 110 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNU6-1254P-201ENST00000391266 104 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNA5SP95-201ENST00000410319 137 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 AL450471.1-201ENST00000447509 127 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNU6-531P-201ENST00000516694 104 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 MIR4536-1-201ENST00000583537 88 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 AC145423.2-201ENST00000610631 239 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 AC084768.2-201ENST00000622736 221 ntBASIC1.96□□□□□ -2.1
SOX4Q06945 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 RNU6-243P-201ENST00000391140 107 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 SNORD93-201ENST00000408813 74 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 SNORA25.16-201ENST00000516741 121 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 AL161722.3-201ENST00000605789 2983 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 AL353997.5-201ENST00000618886 171 ntBASIC1.95□□□□□ -2.1
SOX4Q06945 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SOX4Q06945 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SOX4Q06945 RNU4-58P-201ENST00000363192 141 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 RNU6-1229P-201ENST00000364295 107 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 RNU6-580P-201ENST00000365159 107 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SOX4Q06945 RNU6-482P-201ENST00000391068 107 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 Y_RNA.588-201ENST00000391254 102 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 MIR4299-201ENST00000577899 72 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 MIR4796-201ENST00000580742 81 ntBASIC1.94□□□□□ -2.1
SOX4Q06945 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SOX4Q06945 RNU6-53P-201ENST00000365367 106 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 MIR18B-201ENST00000454574 71 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 RNU7-106P-201ENST00000459514 67 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 U7.4-201ENST00000614961 63 ntBASIC1.93□□□□□ -2.1
SOX4Q06945 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SOX4Q06945 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 RNU1-36P-201ENST00000365130 165 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 RNU6-811P-201ENST00000384069 107 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
SOX4Q06945 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
SOX4Q06945 MIR302D-201ENST00000362275 68 ntBASIC1.91□□□□□ -2.1
SOX4Q06945 RNU6-1094P-201ENST00000362416 104 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms