Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.72□□□□□ -2.68
HIST1H3AP68431 AC132825.6-201ENST00000638861 357 ntBASIC-1.72□□□□□ -2.68
HIST1H3AP68431 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 RNA5SP67-201ENST00000516422 131 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 AP001362.1-201ENST00000625165 124 ntBASIC-1.73□□□□□ -2.69
HIST1H3AP68431 MIR409-201ENST00000362237 79 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 AL606845.1-201ENST00000404881 255 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 RNU6-588P-201ENST00000410281 105 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 AL161932.1-201ENST00000437408 146 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 HSPE1P25-201ENST00000455484 251 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 SNORD2-201ENST00000459163 69 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 RNU7-30P-201ENST00000516835 62 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 snoU18.1-201ENST00000629629 71 ntBASIC-1.74□□□□□ -2.69
HIST1H3AP68431 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 RNU4-90P-201ENST00000362773 141 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 MIR516A2-201ENST00000384888 90 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 MIR516A1-201ENST00000385033 90 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 SNORA79-201ENST00000408376 140 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 SNORD116.3-201ENST00000517176 78 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.75□□□□□ -2.69
HIST1H3AP68431 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 AL138825.1-201ENST00000618587 192 ntBASIC-1.75□□□□□ -2.69
HIST1H3AP68431 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 MIR206-201ENST00000384872 86 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 RNU6-130P-201ENST00000411112 103 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 MIR1270-201ENST00000459320 83 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 RNU6-479P-201ENST00000516348 105 ntBASIC-1.76□□□□□ -2.69
HIST1H3AP68431 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.76□□□□□ -2.69
HIST1H3AP68431 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.77□□□□□ -2.69
HIST1H3AP68431 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.77□□□□□ -2.69
HIST1H3AP68431 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.77□□□□□ -2.69
HIST1H3AP68431 HLA-S-202ENST00000425174 53 ntBASIC-1.77□□□□□ -2.69
HIST1H3AP68431 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.77□□□□□ -2.69
HIST1H3AP68431 U6.100-201ENST00000636230 99 ntBASIC-1.77□□□□□ -2.69
HIST1H3AP68431 SNORA25.1-201ENST00000362326 128 ntBASIC-1.78□□□□□ -2.69
HIST1H3AP68431 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.78□□□□□ -2.69
HIST1H3AP68431 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.78□□□□□ -2.69
HIST1H3AP68431 MTND4LP30-201ENST00000454092 297 ntBASIC-1.78□□□□□ -2.69
HIST1H3AP68431 MIR6773-201ENST00000612812 74 ntBASIC-1.78□□□□□ -2.69
HIST1H3AP68431 MIR376A1-201ENST00000616574 68 ntBASIC-1.78□□□□□ -2.69
HIST1H3AP68431 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.79□□□□□ -2.7
HIST1H3AP68431 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.79□□□□□ -2.7
HIST1H3AP68431 SNORA40.14-201ENST00000516543 86 ntBASIC-1.79□□□□□ -2.7
HIST1H3AP68431 AC068339.1-201ENST00000526965 141 ntBASIC-1.79□□□□□ -2.7
HIST1H3AP68431 AC084781.2-201ENST00000615568 161 ntBASIC-1.79□□□□□ -2.7
HIST1H3AP68431 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 SNORD115-23-201ENST00000364461 82 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.8□□□□□ -2.7
HIST1H3AP68431 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 RNU6-453P-201ENST00000516819 85 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 SNORA20.3-201ENST00000516880 132 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 RNU6-850P-201ENST00000516934 103 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 TRDV1-202ENST00000621643 102 ntBASIC-1.8□□□□□ -2.7
HIST1H3AP68431 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.81□□□□□ -2.7
HIST1H3AP68431 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.81□□□□□ -2.7
HIST1H3AP68431 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.81□□□□□ -2.7
HIST1H3AP68431 MIR4760-201ENST00000585040 80 ntBASIC-1.81□□□□□ -2.7
HIST1H3AP68431 AC138207.3-201ENST00000585289 166 ntBASIC-1.81□□□□□ -2.7
HIST1H3AP68431 AC103591.3-201ENST00000608684 209 ntBASIC-1.81□□□□□ -2.7
HIST1H3AP68431 MIR548O2-201ENST00000616090 70 ntBASIC-1.81□□□□□ -2.7
HIST1H3AP68431 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 RNU6-54P-201ENST00000365563 107 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 MIRLET7B-201ENST00000385140 83 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 RNU6-337P-201ENST00000391243 106 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 AC037487.3-201ENST00000606668 112 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 MIR3688-2-201ENST00000636963 87 ntBASIC-1.82□□□□□ -2.7
HIST1H3AP68431 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.83□□□□□ -2.7
HIST1H3AP68431 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.83□□□□□ -2.7
HIST1H3AP68431 MIR616-201ENST00000385293 97 ntBASIC-1.83□□□□□ -2.7
HIST1H3AP68431 MIR889-201ENST00000401280 79 ntBASIC-1.83□□□□□ -2.7
HIST1H3AP68431 RNU2-51P-201ENST00000410708 197 ntBASIC-1.83□□□□□ -2.7
HIST1H3AP68431 AC009779.6-201ENST00000603972 165 ntBASIC-1.83□□□□□ -2.7
HIST1H3AP68431 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.84□□□□□ -2.7
HIST1H3AP68431 SNORD81.2-201ENST00000365153 76 ntBASIC-1.84□□□□□ -2.7
HIST1H3AP68431 RNU6-211P-201ENST00000384047 107 ntBASIC-1.84□□□□□ -2.7
HIST1H3AP68431 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.84□□□□□ -2.7
HIST1H3AP68431 MIR527-201ENST00000385244 85 ntBASIC-1.84□□□□□ -2.7
HIST1H3AP68431 MIR5591-201ENST00000578248 65 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 355.2 ms