Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-1131P-201ENST00000364955 107 ntBASIC0.95□□□□□ -2.26
LMO4P61968 Y_RNA.355-201ENST00000365462 98 ntBASIC0.95□□□□□ -2.26
LMO4P61968 RNU6-49P-201ENST00000384256 107 ntBASIC0.95□□□□□ -2.26
LMO4P61968 RNU6-939P-201ENST00000384634 107 ntBASIC0.95□□□□□ -2.26
LMO4P61968 MIR34C-201ENST00000384831 77 ntBASIC0.95□□□□□ -2.26
LMO4P61968 MIR563-201ENST00000385080 79 ntBASIC0.95□□□□□ -2.26
LMO4P61968 MT-TN-201ENST00000387400 73 ntBASIC0.95□□□□□ -2.26
LMO4P61968 RNU6-1321P-201ENST00000390905 107 ntBASIC0.95□□□□□ -2.26
LMO4P61968 Y_RNA.601-201ENST00000410500 113 ntBASIC0.95□□□□□ -2.26
LMO4P61968 RNU6-795P-201ENST00000516323 103 ntBASIC0.95□□□□□ -2.26
LMO4P61968 MIR4264-201ENST00000583520 66 ntBASIC0.95□□□□□ -2.26
LMO4P61968 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
LMO4P61968 AL442128.1-201ENST00000615151 90 ntBASIC0.95□□□□□ -2.26
LMO4P61968 AC012531.4-201ENST00000616509 177 ntBASIC0.95□□□□□ -2.26
LMO4P61968 MIR4679-1-201ENST00000637619 75 ntBASIC0.95□□□□□ -2.26
LMO4P61968 RNU6-170P-201ENST00000362832 104 ntBASIC0.94□□□□□ -2.26
LMO4P61968 SNORD114-10-201ENST00000363409 72 ntBASIC0.94□□□□□ -2.26
LMO4P61968 RNU1-93P-201ENST00000364704 169 ntBASIC0.94□□□□□ -2.26
LMO4P61968 SNORA25-201ENST00000384384 134 ntBASIC0.94□□□□□ -2.26
LMO4P61968 MIR150-201ENST00000385048 84 ntBASIC0.94□□□□□ -2.26
LMO4P61968 MIR518E-201ENST00000385252 88 ntBASIC0.94□□□□□ -2.26
LMO4P61968 MIR618-201ENST00000385287 98 ntBASIC0.94□□□□□ -2.26
LMO4P61968 RNU6-1165P-201ENST00000410119 107 ntBASIC0.94□□□□□ -2.26
LMO4P61968 RNU6-613P-201ENST00000410412 108 ntBASIC0.94□□□□□ -2.26
LMO4P61968 AC004941.2-201ENST00000427009 228 ntBASIC0.94□□□□□ -2.26
LMO4P61968 RNU7-62P-201ENST00000458856 62 ntBASIC0.94□□□□□ -2.26
LMO4P61968 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
LMO4P61968 Y_RNA.659-201ENST00000515994 113 ntBASIC0.94□□□□□ -2.26
LMO4P61968 RNU11-2P-201ENST00000516898 142 ntBASIC0.94□□□□□ -2.26
LMO4P61968 MIR4777-201ENST00000583710 86 ntBASIC0.94□□□□□ -2.26
LMO4P61968 AP000753.3-201ENST00000604083 169 ntBASIC0.94□□□□□ -2.26
LMO4P61968 MIR376B-201ENST00000614515 100 ntBASIC0.94□□□□□ -2.26
LMO4P61968 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
LMO4P61968 MIR377-201ENST00000362145 69 ntBASIC0.93□□□□□ -2.26
LMO4P61968 MIR30D-201ENST00000362283 70 ntBASIC0.93□□□□□ -2.26
LMO4P61968 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
LMO4P61968 SNORD45B-201ENST00000364617 72 ntBASIC0.93□□□□□ -2.26
LMO4P61968 Y_RNA.342-201ENST00000365352 113 ntBASIC0.93□□□□□ -2.26
LMO4P61968 Y_RNA.363-201ENST00000365529 113 ntBASIC0.93□□□□□ -2.26
LMO4P61968 Y_RNA.369-201ENST00000365568 117 ntBASIC0.93□□□□□ -2.26
LMO4P61968 RNU6-949P-201ENST00000384040 107 ntBASIC0.93□□□□□ -2.26
LMO4P61968 Y_RNA.508-201ENST00000384502 114 ntBASIC0.93□□□□□ -2.26
LMO4P61968 RNU6-644P-201ENST00000391155 98 ntBASIC0.93□□□□□ -2.26
LMO4P61968 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.93□□□□□ -2.26
LMO4P61968 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.93□□□□□ -2.26
LMO4P61968 snoU13.21-201ENST00000459368 105 ntBASIC0.93□□□□□ -2.26
LMO4P61968 AC048334.1-201ENST00000477975 159 ntBASIC0.93□□□□□ -2.26
LMO4P61968 SNORA31.2-201ENST00000516019 134 ntBASIC0.93□□□□□ -2.26
LMO4P61968 AC006254.2-201ENST00000603259 279 ntBASIC0.93□□□□□ -2.26
LMO4P61968 MALAT1.1-201ENST00000618249 95 ntBASIC0.93□□□□□ -2.26
LMO4P61968 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.93□□□□□ -2.26
LMO4P61968 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LMO4P61968 Y_RNA.95-201ENST00000363079 95 ntBASIC0.92□□□□□ -2.26
LMO4P61968 RNU6-865P-201ENST00000364772 107 ntBASIC0.92□□□□□ -2.26
LMO4P61968 RNY1P7-201ENST00000384743 110 ntBASIC0.92□□□□□ -2.26
LMO4P61968 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
LMO4P61968 AC096949.1-201ENST00000412047 152 ntBASIC0.92□□□□□ -2.26
LMO4P61968 MRPL35P3-201ENST00000421557 364 ntBASIC0.92□□□□□ -2.26
LMO4P61968 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
LMO4P61968 RNU7-48P-201ENST00000458875 63 ntBASIC0.92□□□□□ -2.26
LMO4P61968 RNU7-61P-201ENST00000515897 61 ntBASIC0.92□□□□□ -2.26
LMO4P61968 SNORA70.22-201ENST00000517160 124 ntBASIC0.92□□□□□ -2.26
LMO4P61968 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.92□□□□□ -2.26
LMO4P61968 SNORA4-201ENST00000584302 138 ntBASIC0.92□□□□□ -2.26
LMO4P61968 SEPT14P17-201ENST00000617978 177 ntBASIC0.92□□□□□ -2.26
LMO4P61968 MIR2052-201ENST00000636055 55 ntBASIC0.92□□□□□ -2.26
LMO4P61968 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
LMO4P61968 Y_RNA.168-201ENST00000363740 102 ntBASIC0.91□□□□□ -2.26
LMO4P61968 SNORD38.1-201ENST00000363863 68 ntBASIC0.91□□□□□ -2.26
LMO4P61968 Y_RNA.467-201ENST00000384297 102 ntBASIC0.91□□□□□ -2.26
LMO4P61968 U8.15-201ENST00000390947 134 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-447P-201ENST00000410293 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-1118P-201ENST00000410382 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-1076P-201ENST00000410397 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-355P-201ENST00000410427 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-791P-201ENST00000410467 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-705P-201ENST00000410601 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-1100P-201ENST00000410691 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-860P-201ENST00000410860 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-1217P-201ENST00000411276 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-1054P-201ENST00000411293 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 RNU6-785P-201ENST00000411324 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 AL591704.2-201ENST00000421658 181 ntBASIC0.91□□□□□ -2.26
LMO4P61968 AC109327.2-201ENST00000448339 378 ntBASIC0.91□□□□□ -2.26
LMO4P61968 AC096720.1-201ENST00000604441 183 ntBASIC0.91□□□□□ -2.26
LMO4P61968 U6.90-201ENST00000614007 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 U6.70-201ENST00000620287 104 ntBASIC0.91□□□□□ -2.26
LMO4P61968 Y_RNA.98-201ENST00000363109 102 ntBASIC0.9□□□□□ -2.27
LMO4P61968 Y_RNA.290-201ENST00000364879 114 ntBASIC0.9□□□□□ -2.27
LMO4P61968 RNU6-580P-201ENST00000365159 107 ntBASIC0.9□□□□□ -2.27
LMO4P61968 MT-TF-201ENST00000387314 71 ntBASIC0.9□□□□□ -2.27
LMO4P61968 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
LMO4P61968 SNORA75.2-201ENST00000391138 150 ntBASIC0.9□□□□□ -2.27
LMO4P61968 SNORA75.3-201ENST00000391231 150 ntBASIC0.9□□□□□ -2.27
LMO4P61968 AC138749.4-201ENST00000563970 127 ntBASIC0.9□□□□□ -2.27
LMO4P61968 AC133485.1-201ENST00000567176 124 ntBASIC0.9□□□□□ -2.27
LMO4P61968 AC027335.2-201ENST00000624030 375 ntBASIC0.9□□□□□ -2.27
LMO4P61968 AP001362.1-201ENST00000625165 124 ntBASIC0.9□□□□□ -2.27
LMO4P61968 MIR6767-201ENST00000637302 66 ntBASIC0.9□□□□□ -2.27
LMO4P61968 Y_RNA.220-201ENST00000364244 109 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms