Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 RNU6-1165P-201ENST00000410119 107 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.69□□□□□ -2.14
ITGA1P56199 RNU11-2P-201ENST00000516898 142 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 MIR4668-201ENST00000582284 70 ntBASIC1.69□□□□□ -2.14
ITGA1P56199 MIR103A2-201ENST00000362154 78 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 MIR30D-201ENST00000362283 70 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 RNA5SP264-201ENST00000363115 107 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 Y_RNA.219-201ENST00000364232 113 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 SNORD1A-201ENST00000364968 72 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 Y_RNA.620-201ENST00000411009 88 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 RNU1-98P-201ENST00000458992 160 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 AC079140.2-201ENST00000506193 142 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 RNU6-267P-201ENST00000516714 103 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 AC138749.4-201ENST00000563970 127 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 MIR6516-201ENST00000630554 81 ntBASIC1.68□□□□□ -2.14
ITGA1P56199 MIR377-201ENST00000362145 69 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 SNORD33-201ENST00000362761 85 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 RNU6-1275P-201ENST00000391087 107 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 RNU6-613P-201ENST00000410412 108 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 RPL30P7-201ENST00000479312 323 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 AC090897.1-201ENST00000580909 226 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
ITGA1P56199 RNU6-497P-201ENST00000365316 104 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 RNU6-242P-201ENST00000384359 107 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 RNU6-1065P-201ENST00000384513 106 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 SNORA2B-201ENST00000384583 137 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 RNY1P4-201ENST00000384595 115 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 MT-TF-201ENST00000387314 71 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 RNU4-62P-201ENST00000410125 130 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 MIR3937-201ENST00000580135 106 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 U6.109-201ENST00000636749 87 ntBASIC1.66□□□□□ -2.14
ITGA1P56199 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ITGA1P56199 RNU6-1125P-201ENST00000363601 107 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 RNU6-654P-201ENST00000364373 107 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 RNU6-480P-201ENST00000384332 107 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 MIR181B2-201ENST00000385004 89 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
ITGA1P56199 SNORD78.1-201ENST00000390866 65 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 AC245517.4-201ENST00000448601 281 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
ITGA1P56199 AL513043.2-201ENST00000573941 143 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 MIR5588-201ENST00000581890 63 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 uc_338.6-201ENST00000613544 171 ntBASIC1.65□□□□□ -2.15
ITGA1P56199 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.65□□□□□ -2.15
ITGA1P56199 RNA5SP133-201ENST00000363368 119 ntBASIC1.64□□□□□ -2.15
ITGA1P56199 RNU6-1276P-201ENST00000365372 104 ntBASIC1.64□□□□□ -2.15
ITGA1P56199 Y_RNA.609-201ENST00000410669 89 ntBASIC1.64□□□□□ -2.15
ITGA1P56199 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
ITGA1P56199 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
ITGA1P56199 MIR4500-201ENST00000579472 76 ntBASIC1.64□□□□□ -2.15
ITGA1P56199 AC020891.4-201ENST00000605745 93 ntBASIC1.64□□□□□ -2.15
ITGA1P56199 RNU6-979P-201ENST00000383896 107 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 RNA5SP95-201ENST00000410319 137 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 SNRPGP12-201ENST00000449481 213 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 Y_RNA.685-201ENST00000516532 108 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 RNU6-165P-201ENST00000517170 99 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.63□□□□□ -2.15
ITGA1P56199 MIR3664-201ENST00000579074 99 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 AC025521.1-201ENST00000621624 286 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.63□□□□□ -2.15
ITGA1P56199 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ITGA1P56199 AC008163.1-202ENST00000636004 2889 ntBASIC1.62□□□□□ -2.15
ITGA1P56199 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
ITGA1P56199 Y_RNA.118-201ENST00000363300 101 ntBASIC1.62□□□□□ -2.15
ITGA1P56199 Y_RNA.119-201ENST00000363301 96 ntBASIC1.62□□□□□ -2.15
ITGA1P56199 MIR8070-201ENST00000616510 88 ntBASIC1.62□□□□□ -2.15
ITGA1P56199 MIR3202-2-201ENST00000635980 79 ntBASIC1.62□□□□□ -2.15
ITGA1P56199 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
ITGA1P56199 RNU6-580P-201ENST00000365159 107 ntBASIC1.61□□□□□ -2.15
ITGA1P56199 MIR499A-201ENST00000384903 122 ntBASIC1.61□□□□□ -2.15
ITGA1P56199 AL512310.8-201ENST00000550183 120 ntBASIC1.61□□□□□ -2.15
ITGA1P56199 MIR4303-201ENST00000581299 66 ntBASIC1.61□□□□□ -2.15
ITGA1P56199 RNU6-228P-201ENST00000362700 106 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 RNU6-509P-201ENST00000363519 107 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 Y_RNA.191-201ENST00000363972 113 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 RNU6-571P-201ENST00000384128 107 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 RNU6-1124P-201ENST00000384169 107 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 AL161932.1-201ENST00000437408 146 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 MIR18B-201ENST00000454574 71 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.6□□□□□ -2.15
ITGA1P56199 RNU6-638P-201ENST00000516582 104 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 RNU6-850P-201ENST00000516934 103 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 MIR8066-201ENST00000617280 78 ntBASIC1.6□□□□□ -2.15
ITGA1P56199 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.6□□□□□ -2.15
ITGA1P56199 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
ITGA1P56199 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ITGA1P56199 RNU6-633P-201ENST00000362612 103 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 Y_RNA.57-201ENST00000362806 113 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 SNORA25.9-201ENST00000365087 128 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 Y_RNA.508-201ENST00000384502 114 ntBASIC1.59□□□□□ -2.15
ITGA1P56199 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms