Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Y_RNA.198-201ENST00000364013 98 ntBASIC0.61□□□□□ -2.31
CDH11P55287 Y_RNA.466-201ENST00000384294 113 ntBASIC0.61□□□□□ -2.31
CDH11P55287 RNA5SP136-201ENST00000410906 107 ntBASIC0.61□□□□□ -2.31
CDH11P55287 RPL39P25-201ENST00000449384 154 ntBASIC0.61□□□□□ -2.31
CDH11P55287 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.61□□□□□ -2.31
CDH11P55287 SNORA25.16-201ENST00000516741 121 ntBASIC0.61□□□□□ -2.31
CDH11P55287 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.61□□□□□ -2.31
CDH11P55287 AC138749.4-201ENST00000563970 127 ntBASIC0.61□□□□□ -2.31
CDH11P55287 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.61□□□□□ -2.31
CDH11P55287 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
CDH11P55287 RNU6-235P-201ENST00000362644 107 ntBASIC0.6□□□□□ -2.31
CDH11P55287 RNU6-774P-201ENST00000363238 107 ntBASIC0.6□□□□□ -2.31
CDH11P55287 SNORD58C-201ENST00000365223 64 ntBASIC0.6□□□□□ -2.31
CDH11P55287 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
CDH11P55287 RNU6-1307P-201ENST00000391012 103 ntBASIC0.6□□□□□ -2.31
CDH11P55287 RNU6-735P-201ENST00000410612 107 ntBASIC0.6□□□□□ -2.31
CDH11P55287 RNA5SP436-201ENST00000516020 115 ntBASIC0.6□□□□□ -2.31
CDH11P55287 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.6□□□□□ -2.31
CDH11P55287 SNORD115-19-201ENST00000363098 82 ntBASIC0.59□□□□□ -2.31
CDH11P55287 SNORD115-18-201ENST00000363293 82 ntBASIC0.59□□□□□ -2.31
CDH11P55287 SNORD115-17-201ENST00000364612 82 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNU6-187P-201ENST00000384139 106 ntBASIC0.59□□□□□ -2.31
CDH11P55287 MIR206-201ENST00000384872 86 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNU6-1321P-201ENST00000390905 107 ntBASIC0.59□□□□□ -2.31
CDH11P55287 MIR1263-201ENST00000408324 86 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNA5SP222-201ENST00000411039 105 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNU6-1194P-201ENST00000516208 104 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNA5SP480-201ENST00000516840 109 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNU6-1234P-201ENST00000516877 103 ntBASIC0.59□□□□□ -2.31
CDH11P55287 AC105081.1-201ENST00000617727 106 ntBASIC0.59□□□□□ -2.31
CDH11P55287 uc_338.16-201ENST00000621804 95 ntBASIC0.59□□□□□ -2.31
CDH11P55287 RNA5SP133-201ENST00000363368 119 ntBASIC0.58□□□□□ -2.32
CDH11P55287 RNY1P2-201ENST00000364820 117 ntBASIC0.58□□□□□ -2.32
CDH11P55287 RNU6-616P-201ENST00000384353 107 ntBASIC0.58□□□□□ -2.32
CDH11P55287 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.58□□□□□ -2.32
CDH11P55287 RNU6-704P-201ENST00000364162 103 ntBASIC0.57□□□□□ -2.32
CDH11P55287 RNU4-45P-201ENST00000365469 141 ntBASIC0.57□□□□□ -2.32
CDH11P55287 MIR539-201ENST00000365690 78 ntBASIC0.57□□□□□ -2.32
CDH11P55287 Y_RNA.528-201ENST00000384575 108 ntBASIC0.57□□□□□ -2.32
CDH11P55287 Y_RNA.630-201ENST00000411370 108 ntBASIC0.57□□□□□ -2.32
CDH11P55287 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.57□□□□□ -2.32
CDH11P55287 RNU6-531P-201ENST00000516694 104 ntBASIC0.57□□□□□ -2.32
CDH11P55287 RNU6-971P-201ENST00000516920 106 ntBASIC0.57□□□□□ -2.32
CDH11P55287 MTND5P34-201ENST00000568888 325 ntBASIC0.57□□□□□ -2.32
CDH11P55287 MIR3163-201ENST00000581592 73 ntBASIC0.57□□□□□ -2.32
CDH11P55287 Y_RNA.773-201ENST00000607168 90 ntBASIC0.57□□□□□ -2.32
CDH11P55287 U6.109-201ENST00000636749 87 ntBASIC0.57□□□□□ -2.32
CDH11P55287 Y_RNA.218-201ENST00000364218 104 ntBASIC0.56□□□□□ -2.32
CDH11P55287 Y_RNA.536-201ENST00000384621 113 ntBASIC0.56□□□□□ -2.32
CDH11P55287 Y_RNA.540-201ENST00000384638 111 ntBASIC0.56□□□□□ -2.32
CDH11P55287 RNU6-291P-201ENST00000384720 107 ntBASIC0.56□□□□□ -2.32
CDH11P55287 SNORD77B-201ENST00000391112 67 ntBASIC0.56□□□□□ -2.32
CDH11P55287 RNU7-6P-201ENST00000516845 62 ntBASIC0.56□□□□□ -2.32
CDH11P55287 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
CDH11P55287 Y_RNA.32-201ENST00000362589 110 ntBASIC0.55□□□□□ -2.32
CDH11P55287 Y_RNA.119-201ENST00000363301 96 ntBASIC0.55□□□□□ -2.32
CDH11P55287 Y_RNA.213-201ENST00000364178 111 ntBASIC0.55□□□□□ -2.32
CDH11P55287 SNORD115-35-201ENST00000365122 82 ntBASIC0.55□□□□□ -2.32
CDH11P55287 SNORA72.6-201ENST00000384520 129 ntBASIC0.55□□□□□ -2.32
CDH11P55287 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
CDH11P55287 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
CDH11P55287 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
CDH11P55287 RNU6-1211P-201ENST00000459179 105 ntBASIC0.55□□□□□ -2.32
CDH11P55287 RNU6-772P-201ENST00000516042 105 ntBASIC0.55□□□□□ -2.32
CDH11P55287 RNU7-2P-201ENST00000516096 62 ntBASIC0.55□□□□□ -2.32
CDH11P55287 AC025166.1-201ENST00000612411 163 ntBASIC0.55□□□□□ -2.32
CDH11P55287 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
CDH11P55287 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.54□□□□□ -2.32
CDH11P55287 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
CDH11P55287 RNU4-58P-201ENST00000363192 141 ntBASIC0.54□□□□□ -2.32
CDH11P55287 Y_RNA.448-201ENST00000384185 108 ntBASIC0.54□□□□□ -2.32
CDH11P55287 MIR140-201ENST00000385282 100 ntBASIC0.54□□□□□ -2.32
CDH11P55287 RNU7-48P-201ENST00000458875 63 ntBASIC0.54□□□□□ -2.32
CDH11P55287 RNU7-107P-201ENST00000459121 61 ntBASIC0.54□□□□□ -2.32
CDH11P55287 SNORA31.14-201ENST00000516728 116 ntBASIC0.54□□□□□ -2.32
CDH11P55287 MIR3678-201ENST00000578455 94 ntBASIC0.54□□□□□ -2.32
CDH11P55287 MTND5P18-201ENST00000445624 1801 ntBASIC0.53□□□□□ -2.32
CDH11P55287 Y_RNA.36-201ENST00000362602 112 ntBASIC0.53□□□□□ -2.32
CDH11P55287 RNA5SP117-201ENST00000365294 118 ntBASIC0.53□□□□□ -2.32
CDH11P55287 SNORA36.2-201ENST00000384004 127 ntBASIC0.53□□□□□ -2.32
CDH11P55287 RNU6-80P-201ENST00000384195 107 ntBASIC0.53□□□□□ -2.32
CDH11P55287 Y_RNA.525-201ENST00000384570 113 ntBASIC0.53□□□□□ -2.32
CDH11P55287 RNU6-429P-201ENST00000384582 108 ntBASIC0.53□□□□□ -2.32
CDH11P55287 Y_RNA.697-201ENST00000516776 113 ntBASIC0.53□□□□□ -2.32
CDH11P55287 Y_RNA.712-201ENST00000517011 92 ntBASIC0.53□□□□□ -2.32
CDH11P55287 MIR1255B1-201ENST00000636325 63 ntBASIC0.53□□□□□ -2.32
CDH11P55287 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
CDH11P55287 Y_RNA.127-201ENST00000363386 109 ntBASIC0.52□□□□□ -2.33
CDH11P55287 Y_RNA.174-201ENST00000363781 105 ntBASIC0.52□□□□□ -2.33
CDH11P55287 RNA5SP245-201ENST00000364239 121 ntBASIC0.52□□□□□ -2.33
CDH11P55287 Y_RNA.328-201ENST00000365208 113 ntBASIC0.52□□□□□ -2.33
CDH11P55287 MIR548D2-201ENST00000384955 97 ntBASIC0.52□□□□□ -2.33
CDH11P55287 MIR644A-201ENST00000385262 94 ntBASIC0.52□□□□□ -2.33
CDH11P55287 RNU6-1061P-201ENST00000516530 99 ntBASIC0.52□□□□□ -2.33
CDH11P55287 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
CDH11P55287 RN7SL793P-201ENST00000583259 296 ntBASIC0.52□□□□□ -2.33
CDH11P55287 MIR376B-201ENST00000614515 100 ntBASIC0.52□□□□□ -2.33
CDH11P55287 Y_RNA.98-201ENST00000363109 102 ntBASIC0.51□□□□□ -2.33
CDH11P55287 SNORD114-26-201ENST00000363543 72 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms