Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
LBX1P52954 MIR548I1-201ENST00000408810 149 ntBASIC0.61□□□□□ -2.31
LBX1P52954 AL022718.1-201ENST00000412004 84 ntBASIC0.61□□□□□ -2.31
LBX1P52954 AC114737.2-201ENST00000421583 173 ntBASIC0.61□□□□□ -2.31
LBX1P52954 AL512326.2-201ENST00000426359 151 ntBASIC0.61□□□□□ -2.31
LBX1P52954 RNU7-102P-201ENST00000458948 62 ntBASIC0.61□□□□□ -2.31
LBX1P52954 RNU7-123P-201ENST00000515911 60 ntBASIC0.61□□□□□ -2.31
LBX1P52954 MTND5P41-201ENST00000517498 206 ntBASIC0.61□□□□□ -2.31
LBX1P52954 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
LBX1P52954 AC108081.1-201ENST00000604358 221 ntBASIC0.61□□□□□ -2.31
LBX1P52954 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
LBX1P52954 RNU6-151P-201ENST00000364158 107 ntBASIC0.6□□□□□ -2.31
LBX1P52954 RNU6-907P-201ENST00000390924 102 ntBASIC0.6□□□□□ -2.31
LBX1P52954 SNORD37.2-201ENST00000391075 66 ntBASIC0.6□□□□□ -2.31
LBX1P52954 Y_RNA.690-201ENST00000516603 95 ntBASIC0.6□□□□□ -2.31
LBX1P52954 RNU6-765P-201ENST00000516916 99 ntBASIC0.6□□□□□ -2.31
LBX1P52954 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
LBX1P52954 AP001340.1-201ENST00000624405 217 ntBASIC0.6□□□□□ -2.31
LBX1P52954 Y_RNA.270-201ENST00000364693 104 ntBASIC0.59□□□□□ -2.31
LBX1P52954 RNU4-45P-201ENST00000365469 141 ntBASIC0.59□□□□□ -2.31
LBX1P52954 Y_RNA.400-201ENST00000383963 111 ntBASIC0.59□□□□□ -2.31
LBX1P52954 Y_RNA.531-201ENST00000384589 121 ntBASIC0.59□□□□□ -2.31
LBX1P52954 RNU6-460P-201ENST00000391158 108 ntBASIC0.59□□□□□ -2.31
LBX1P52954 RNA5SP237-201ENST00000410414 113 ntBASIC0.59□□□□□ -2.31
LBX1P52954 RNU7-113P-201ENST00000459273 62 ntBASIC0.59□□□□□ -2.31
LBX1P52954 AC133485.4-201ENST00000561835 220 ntBASIC0.59□□□□□ -2.31
LBX1P52954 AC138907.4-201ENST00000570107 226 ntBASIC0.59□□□□□ -2.31
LBX1P52954 MIR548AE2-201ENST00000583456 67 ntBASIC0.59□□□□□ -2.31
LBX1P52954 MIR18A-201ENST00000362310 71 ntBASIC0.58□□□□□ -2.32
LBX1P52954 Y_RNA.298-201ENST00000364960 107 ntBASIC0.58□□□□□ -2.32
LBX1P52954 Y_RNA.366-201ENST00000365540 102 ntBASIC0.58□□□□□ -2.32
LBX1P52954 AC002350.1-201ENST00000490759 375 ntBASIC0.58□□□□□ -2.32
LBX1P52954 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
LBX1P52954 IGKV1-22-201ENST00000524313 326 ntBASIC0.58□□□□□ -2.32
LBX1P52954 MIR3121-201ENST00000579680 77 ntBASIC0.58□□□□□ -2.32
LBX1P52954 MIR3612-201ENST00000579753 87 ntBASIC0.58□□□□□ -2.32
LBX1P52954 AC021443.1-201ENST00000604478 211 ntBASIC0.58□□□□□ -2.32
LBX1P52954 AC021753.1-201ENST00000635724 168 ntBASIC0.58□□□□□ -2.32
LBX1P52954 RNU6-1237P-201ENST00000384777 107 ntBASIC0.57□□□□□ -2.32
LBX1P52954 MIR4491-201ENST00000581087 68 ntBASIC0.57□□□□□ -2.32
LBX1P52954 AL359881.1-201ENST00000602916 267 ntBASIC0.57□□□□□ -2.32
LBX1P52954 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.57□□□□□ -2.32
LBX1P52954 MIR6082-201ENST00000613604 109 ntBASIC0.57□□□□□ -2.32
LBX1P52954 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
LBX1P52954 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
LBX1P52954 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
LBX1P52954 Y_RNA.215-201ENST00000364204 112 ntBASIC0.56□□□□□ -2.32
LBX1P52954 RNU6-915P-201ENST00000364943 103 ntBASIC0.56□□□□□ -2.32
LBX1P52954 RNU4-83P-201ENST00000410863 133 ntBASIC0.56□□□□□ -2.32
LBX1P52954 RNA5SP222-201ENST00000411039 105 ntBASIC0.56□□□□□ -2.32
LBX1P52954 RNU7-79P-201ENST00000516082 62 ntBASIC0.56□□□□□ -2.32
LBX1P52954 RNU7-200P-201ENST00000516105 62 ntBASIC0.56□□□□□ -2.32
LBX1P52954 RNU7-137P-201ENST00000516788 62 ntBASIC0.56□□□□□ -2.32
LBX1P52954 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.56□□□□□ -2.32
LBX1P52954 MIR548X2-201ENST00000579776 100 ntBASIC0.56□□□□□ -2.32
LBX1P52954 RNA5SP205-201ENST00000364653 136 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNY1P5-201ENST00000383890 115 ntBASIC0.55□□□□□ -2.32
LBX1P52954 Y_RNA.420-201ENST00000384043 110 ntBASIC0.55□□□□□ -2.32
LBX1P52954 Y_RNA.506-201ENST00000384494 102 ntBASIC0.55□□□□□ -2.32
LBX1P52954 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNA5SP299-201ENST00000391203 116 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-447P-201ENST00000410293 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-1118P-201ENST00000410382 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-1076P-201ENST00000410397 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-355P-201ENST00000410427 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-791P-201ENST00000410467 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-705P-201ENST00000410601 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-1100P-201ENST00000410691 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-860P-201ENST00000410860 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-1217P-201ENST00000411276 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-785P-201ENST00000411324 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU7-164P-201ENST00000459221 62 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNY4P20-201ENST00000516678 93 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-255P-201ENST00000516957 105 ntBASIC0.55□□□□□ -2.32
LBX1P52954 RNU6-448P-201ENST00000517052 107 ntBASIC0.55□□□□□ -2.32
LBX1P52954 U6.90-201ENST00000614007 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 U6.70-201ENST00000620287 104 ntBASIC0.55□□□□□ -2.32
LBX1P52954 Y_RNA.13-201ENST00000362403 112 ntBASIC0.54□□□□□ -2.32
LBX1P52954 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
LBX1P52954 RNU6-364P-201ENST00000384387 107 ntBASIC0.54□□□□□ -2.32
LBX1P52954 SNORD93-201ENST00000408813 74 ntBASIC0.54□□□□□ -2.32
LBX1P52954 SNORA25.12-201ENST00000516202 82 ntBASIC0.54□□□□□ -2.32
LBX1P52954 RNU6-1194P-201ENST00000516208 104 ntBASIC0.54□□□□□ -2.32
LBX1P52954 RNA5SP33-201ENST00000516687 98 ntBASIC0.54□□□□□ -2.32
LBX1P52954 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.54□□□□□ -2.32
LBX1P52954 SNORD118-201ENST00000363593 134 ntBASIC0.53□□□□□ -2.32
LBX1P52954 SNORD18B-201ENST00000365659 72 ntBASIC0.53□□□□□ -2.32
LBX1P52954 SNORA36.2-201ENST00000384004 127 ntBASIC0.53□□□□□ -2.32
LBX1P52954 RNU6-1104P-201ENST00000384723 104 ntBASIC0.53□□□□□ -2.32
LBX1P52954 MIR604-201ENST00000384880 94 ntBASIC0.53□□□□□ -2.32
LBX1P52954 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
LBX1P52954 AC022523.2-201ENST00000561045 150 ntBASIC0.53□□□□□ -2.32
LBX1P52954 AC108676.2-201ENST00000605225 163 ntBASIC0.53□□□□□ -2.32
LBX1P52954 AL137067.1-201ENST00000615933 120 ntBASIC0.53□□□□□ -2.32
LBX1P52954 MIR6718-201ENST00000616153 80 ntBASIC0.53□□□□□ -2.32
LBX1P52954 SNORD114-10-201ENST00000363409 72 ntBASIC0.52□□□□□ -2.33
LBX1P52954 SNORA32-201ENST00000384072 121 ntBASIC0.52□□□□□ -2.33
LBX1P52954 RNU4-69P-201ENST00000410677 143 ntBASIC0.52□□□□□ -2.33
LBX1P52954 Y_RNA.610-201ENST00000410681 103 ntBASIC0.52□□□□□ -2.33
LBX1P52954 Y_RNA.617-201ENST00000410920 90 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 1217.9 ms