Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 Z97988.1-201ENST00000637697 135 ntBASIC1.02□□□□□ -2.25
KRT9P35527 RNU6-363P-201ENST00000362895 105 ntBASIC1.01□□□□□ -2.25
KRT9P35527 SNORD115-19-201ENST00000363098 82 ntBASIC1.01□□□□□ -2.25
KRT9P35527 SNORD115-18-201ENST00000363293 82 ntBASIC1.01□□□□□ -2.25
KRT9P35527 Y_RNA.155-201ENST00000363632 101 ntBASIC1.01□□□□□ -2.25
KRT9P35527 SNORD115-17-201ENST00000364612 82 ntBASIC1.01□□□□□ -2.25
KRT9P35527 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
KRT9P35527 Y_RNA.328-201ENST00000365208 113 ntBASIC1.01□□□□□ -2.25
KRT9P35527 SNORA32-201ENST00000384072 121 ntBASIC1.01□□□□□ -2.25
KRT9P35527 RNU6-409P-201ENST00000384114 104 ntBASIC1.01□□□□□ -2.25
KRT9P35527 RNA5SP95-201ENST00000410319 137 ntBASIC1.01□□□□□ -2.25
KRT9P35527 RNU6-613P-201ENST00000410412 108 ntBASIC1.01□□□□□ -2.25
KRT9P35527 Y_RNA.677-201ENST00000516401 85 ntBASIC1.01□□□□□ -2.25
KRT9P35527 RNU4-67P-201ENST00000364569 141 ntBASIC1□□□□□ -2.25
KRT9P35527 RNU6-616P-201ENST00000384353 107 ntBASIC1□□□□□ -2.25
KRT9P35527 Y_RNA.544-201ENST00000384650 113 ntBASIC1□□□□□ -2.25
KRT9P35527 SNORD111-201ENST00000408139 94 ntBASIC1□□□□□ -2.25
KRT9P35527 RNU6-733P-201ENST00000410759 104 ntBASIC1□□□□□ -2.25
KRT9P35527 RNU6-602P-201ENST00000411155 105 ntBASIC1□□□□□ -2.25
KRT9P35527 RNA5SP170-201ENST00000517150 101 ntBASIC1□□□□□ -2.25
KRT9P35527 Y_RNA.773-201ENST00000607168 90 ntBASIC1□□□□□ -2.25
KRT9P35527 Y_RNA.36-201ENST00000362602 112 ntBASIC0.99□□□□□ -2.25
KRT9P35527 Y_RNA.78-201ENST00000362970 110 ntBASIC0.99□□□□□ -2.25
KRT9P35527 RNU4-36P-201ENST00000364294 144 ntBASIC0.99□□□□□ -2.25
KRT9P35527 SNORD113.3-201ENST00000364630 78 ntBASIC0.99□□□□□ -2.25
KRT9P35527 RNU6-396P-201ENST00000365369 105 ntBASIC0.99□□□□□ -2.25
KRT9P35527 SNORA18-201ENST00000384416 132 ntBASIC0.99□□□□□ -2.25
KRT9P35527 RNU6-1237P-201ENST00000384777 107 ntBASIC0.99□□□□□ -2.25
KRT9P35527 SNORA7.5-201ENST00000410672 110 ntBASIC0.99□□□□□ -2.25
KRT9P35527 Y_RNA.694-201ENST00000516677 117 ntBASIC0.99□□□□□ -2.25
KRT9P35527 DEFB131E-201ENST00000532329 154 ntBASIC0.99□□□□□ -2.25
KRT9P35527 AC141557.1-201ENST00000540982 400 ntBASIC0.99□□□□□ -2.25
KRT9P35527 MIR151B-201ENST00000584249 96 ntBASIC0.99□□□□□ -2.25
KRT9P35527 MIR1255B1-201ENST00000636325 63 ntBASIC0.99□□□□□ -2.25
KRT9P35527 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KRT9P35527 RNU6-342P-201ENST00000384521 104 ntBASIC0.98□□□□□ -2.25
KRT9P35527 SNORA2B-201ENST00000384583 137 ntBASIC0.98□□□□□ -2.25
KRT9P35527 MIR598-201ENST00000384868 97 ntBASIC0.98□□□□□ -2.25
KRT9P35527 MIR590-201ENST00000385008 97 ntBASIC0.98□□□□□ -2.25
KRT9P35527 RNA5SP237-201ENST00000410414 113 ntBASIC0.98□□□□□ -2.25
KRT9P35527 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
KRT9P35527 RNU6-1086P-201ENST00000410930 100 ntBASIC0.98□□□□□ -2.25
KRT9P35527 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.98□□□□□ -2.25
KRT9P35527 RNU7-79P-201ENST00000516082 62 ntBASIC0.98□□□□□ -2.25
KRT9P35527 SNORA40.13-201ENST00000516379 120 ntBASIC0.98□□□□□ -2.25
KRT9P35527 RNU6-521P-201ENST00000516663 105 ntBASIC0.98□□□□□ -2.25
KRT9P35527 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
KRT9P35527 MIR6788-201ENST00000618842 66 ntBASIC0.98□□□□□ -2.25
KRT9P35527 AL512310.12-203ENST00000640543 90 ntBASIC0.98□□□□□ -2.25
KRT9P35527 Y_RNA.10-201ENST00000362371 110 ntBASIC0.97□□□□□ -2.25
KRT9P35527 RNU6-1298P-201ENST00000362456 101 ntBASIC0.97□□□□□ -2.25
KRT9P35527 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
KRT9P35527 RNY4P30-201ENST00000410216 95 ntBASIC0.97□□□□□ -2.25
KRT9P35527 AC090844.1-201ENST00000422019 156 ntBASIC0.97□□□□□ -2.25
KRT9P35527 AC067940.1-201ENST00000458411 300 ntBASIC0.97□□□□□ -2.25
KRT9P35527 RNU6-1223P-201ENST00000517124 104 ntBASIC0.97□□□□□ -2.25
KRT9P35527 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.97□□□□□ -2.25
KRT9P35527 AP001318.4-201ENST00000616637 121 ntBASIC0.97□□□□□ -2.25
KRT9P35527 Y_RNA.818-201ENST00000618813 71 ntBASIC0.97□□□□□ -2.25
KRT9P35527 Y_RNA.43-201ENST00000362670 111 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNY3P2-201ENST00000362918 102 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU6-1099P-201ENST00000363533 107 ntBASIC0.96□□□□□ -2.26
KRT9P35527 SNORD114-26-201ENST00000363543 72 ntBASIC0.96□□□□□ -2.26
KRT9P35527 Y_RNA.360-201ENST00000365512 102 ntBASIC0.96□□□□□ -2.26
KRT9P35527 MIR605-201ENST00000385078 83 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU6-205P-201ENST00000390858 107 ntBASIC0.96□□□□□ -2.26
KRT9P35527 SNORD89-201ENST00000390981 114 ntBASIC0.96□□□□□ -2.26
KRT9P35527 Y_RNA.601-201ENST00000410500 113 ntBASIC0.96□□□□□ -2.26
KRT9P35527 SNORA19.1-201ENST00000410656 129 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU7-2P-201ENST00000516096 62 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU6-904P-201ENST00000516206 101 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU6-109P-201ENST00000516364 107 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU6-184P-201ENST00000516514 107 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU6-1018P-201ENST00000516577 106 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU7-35P-201ENST00000517174 62 ntBASIC0.96□□□□□ -2.26
KRT9P35527 MIR4694-201ENST00000578534 80 ntBASIC0.96□□□□□ -2.26
KRT9P35527 AP000753.3-201ENST00000604083 169 ntBASIC0.96□□□□□ -2.26
KRT9P35527 MIR2052-201ENST00000636055 55 ntBASIC0.96□□□□□ -2.26
KRT9P35527 RNU6-1255P-201ENST00000363434 112 ntBASIC0.95□□□□□ -2.26
KRT9P35527 Y_RNA.168-201ENST00000363740 102 ntBASIC0.95□□□□□ -2.26
KRT9P35527 SNORD115-35-201ENST00000365122 82 ntBASIC0.95□□□□□ -2.26
KRT9P35527 RNU6-1335P-201ENST00000365426 107 ntBASIC0.95□□□□□ -2.26
KRT9P35527 RNY1P4-201ENST00000384595 115 ntBASIC0.95□□□□□ -2.26
KRT9P35527 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
KRT9P35527 U7.7-201ENST00000459276 60 ntBASIC0.95□□□□□ -2.26
KRT9P35527 MIR1270-201ENST00000459320 83 ntBASIC0.95□□□□□ -2.26
KRT9P35527 SCARNA23-201ENST00000516060 130 ntBASIC0.95□□□□□ -2.26
KRT9P35527 Y_RNA.93-201ENST00000363066 109 ntBASIC0.94□□□□□ -2.26
KRT9P35527 RNU6-832P-201ENST00000363319 107 ntBASIC0.94□□□□□ -2.26
KRT9P35527 Y_RNA.348-201ENST00000365403 103 ntBASIC0.94□□□□□ -2.26
KRT9P35527 MIR206-201ENST00000384872 86 ntBASIC0.94□□□□□ -2.26
KRT9P35527 MIR588-201ENST00000384900 83 ntBASIC0.94□□□□□ -2.26
KRT9P35527 MIR577-201ENST00000385196 96 ntBASIC0.94□□□□□ -2.26
KRT9P35527 RNU6-679P-201ENST00000391003 106 ntBASIC0.94□□□□□ -2.26
KRT9P35527 AC244023.1-201ENST00000426884 112 ntBASIC0.94□□□□□ -2.26
KRT9P35527 AC015818.7-201ENST00000428754 109 ntBASIC0.94□□□□□ -2.26
KRT9P35527 AC087499.7-201ENST00000441958 109 ntBASIC0.94□□□□□ -2.26
KRT9P35527 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
KRT9P35527 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
KRT9P35527 SNORD67.1-201ENST00000516618 108 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms