Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MIR6515-201ENST00000619843 57 ntBASIC0.82□□□□□ -2.28
HOXA13P31271 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
HOXA13P31271 Y_RNA.213-201ENST00000364178 111 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 RNU6-1117P-201ENST00000384525 104 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 MIR206-201ENST00000384872 86 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 MIR548D2-201ENST00000384955 97 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 MIR548A1-201ENST00000385041 97 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 MT-TF-201ENST00000387314 71 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
HOXA13P31271 AL353813.1-201ENST00000440700 253 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
HOXA13P31271 Y_RNA.540-201ENST00000384638 111 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 MIR520F-201ENST00000384824 87 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 RNU6-1321P-201ENST00000390905 107 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 MIR1257-201ENST00000408490 117 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 AC008267.6-201ENST00000441664 139 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 MIR18B-201ENST00000454574 71 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 SNORA25.16-201ENST00000516741 121 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 AC011195.1-201ENST00000578177 177 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 MIR3163-201ENST00000581592 73 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 MIR8066-201ENST00000617280 78 ntBASIC0.8□□□□□ -2.28
HOXA13P31271 Y_RNA.362-201ENST00000365518 110 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 Y_RNA.448-201ENST00000384185 108 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 RNU6-1154P-201ENST00000391001 104 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 SNORD93-201ENST00000408813 74 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 Y_RNA.649-201ENST00000459077 103 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 RNU6-789P-201ENST00000517105 102 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 MIR4491-201ENST00000581087 68 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 MIR4804-201ENST00000581683 73 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
HOXA13P31271 Y_RNA.13-201ENST00000362403 112 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 SNORD115-19-201ENST00000363098 82 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 SNORD115-18-201ENST00000363293 82 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 SNORD115-17-201ENST00000364612 82 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 RNA5SP205-201ENST00000364653 136 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 RNU6-429P-201ENST00000384582 108 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 RPL39P25-201ENST00000449384 154 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 RNU7-102P-201ENST00000458948 62 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 AC138749.4-201ENST00000563970 127 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 MTND5P34-201ENST00000568888 325 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.78□□□□□ -2.28
HOXA13P31271 U6.109-201ENST00000636749 87 ntBASIC0.78□□□□□ -2.28
HOXA13P31271 RNU6-403P-201ENST00000363163 104 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 Y_RNA.346-201ENST00000365385 112 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 SNORA72.6-201ENST00000384520 129 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 Y_RNA.563-201ENST00000384707 108 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 MIR125B2-201ENST00000385128 89 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 RNU2-51P-201ENST00000410708 197 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 RNU4-83P-201ENST00000410863 133 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 RNU6-479P-201ENST00000516348 105 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 MIR6129-201ENST00000616087 109 ntBASIC0.77□□□□□ -2.29
HOXA13P31271 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
HOXA13P31271 Y_RNA.35-201ENST00000362601 101 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 Y_RNA.42-201ENST00000362660 108 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 RNA5SP133-201ENST00000363368 119 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 Y_RNA.299-201ENST00000364973 94 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 MIR520H-201ENST00000385126 88 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 MIR548A3-201ENST00000385297 97 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 SNORD77B-201ENST00000391112 67 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.76□□□□□ -2.29
HOXA13P31271 RNU7-56P-201ENST00000458744 62 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 RNU7-2P-201ENST00000516096 62 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 RNU6-313P-201ENST00000516317 112 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 RNU6-531P-201ENST00000516694 104 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 RNU7-156P-201ENST00000517214 74 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 AC007012.1-201ENST00000567192 175 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 U6.95-201ENST00000636931 70 ntBASIC0.76□□□□□ -2.29
HOXA13P31271 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.76□□□□□ -2.29
HOXA13P31271 SNORA63.5-201ENST00000363548 123 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 RNY1P8-201ENST00000383970 114 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 MIR34C-201ENST00000384831 77 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 RNU1-119P-201ENST00000391122 165 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 SNORA7.5-201ENST00000410672 110 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 RNU6-521P-201ENST00000516663 105 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.75□□□□□ -2.29
HOXA13P31271 AL670379.3-201ENST00000605040 251 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 MIR376B-201ENST00000614515 100 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 PVT1_3.1-201ENST00000620853 95 ntBASIC0.75□□□□□ -2.29
HOXA13P31271 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 SNORD114-10-201ENST00000363409 72 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HOXA13P31271 SNORA36.2-201ENST00000384004 127 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 RNU6-679P-201ENST00000391003 106 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 MIR938-201ENST00000401216 83 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 RNU6-62P-201ENST00000516526 102 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 SNORD92-201ENST00000585078 85 ntBASIC0.74□□□□□ -2.29
HOXA13P31271 Y_RNA.247-201ENST00000364500 92 ntBASIC0.73□□□□□ -2.29
HOXA13P31271 RNY1P2-201ENST00000364820 117 ntBASIC0.73□□□□□ -2.29
HOXA13P31271 SNORD115-35-201ENST00000365122 82 ntBASIC0.73□□□□□ -2.29
HOXA13P31271 RNU6-364P-201ENST00000384387 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms