Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXA10P31260 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXA10P31260 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXA10P31260 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HOXA10P31260 RNU6-571P-201ENST00000384128 107 ntBASIC2.23□□□□□ -2.05
HOXA10P31260 RNA5SP237-201ENST00000410414 113 ntBASIC2.23□□□□□ -2.05
HOXA10P31260 RNU6-871P-201ENST00000516122 100 ntBASIC2.23□□□□□ -2.05
HOXA10P31260 MIR4287-201ENST00000579398 78 ntBASIC2.23□□□□□ -2.05
HOXA10P31260 AC090897.1-201ENST00000580909 226 ntBASIC2.23□□□□□ -2.05
HOXA10P31260 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
HOXA10P31260 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXA10P31260 MIR518A2-201ENST00000384966 87 ntBASIC2.22□□□□□ -2.05
HOXA10P31260 RNU6-850P-201ENST00000516934 103 ntBASIC2.22□□□□□ -2.05
HOXA10P31260 MIR3935-201ENST00000583472 104 ntBASIC2.22□□□□□ -2.05
HOXA10P31260 MIR4251-201ENST00000635819 61 ntBASIC2.22□□□□□ -2.05
HOXA10P31260 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HOXA10P31260 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXA10P31260 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HOXA10P31260 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HOXA10P31260 RNA5SP325-201ENST00000363756 130 ntBASIC2.21□□□□□ -2.06
HOXA10P31260 AC138749.4-201ENST00000563970 127 ntBASIC2.21□□□□□ -2.06
HOXA10P31260 MIR4303-201ENST00000581299 66 ntBASIC2.21□□□□□ -2.06
HOXA10P31260 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXA10P31260 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXA10P31260 AL359821.1-201ENST00000605519 182 ntBASIC2.2□□□□□ -2.06
HOXA10P31260 uc_338.20-201ENST00000621563 178 ntBASIC2.2□□□□□ -2.06
HOXA10P31260 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXA10P31260 RNU6-1123P-201ENST00000362347 106 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 RNU6-161P-201ENST00000363051 106 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 RNU6-811P-201ENST00000384069 107 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 MIR520H-201ENST00000385126 88 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 MIR653-201ENST00000385279 96 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 RNA5SP501-201ENST00000410990 112 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 AC027119.1-201ENST00000440877 241 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 snoU13.2-201ENST00000459201 104 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 AC125388.1-201ENST00000459631 156 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 RNU6-1015P-201ENST00000517121 99 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 MIR4500-201ENST00000579472 76 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 MIR1297-201ENST00000637311 77 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 AC008163.1-202ENST00000636004 2889 ntBASIC2.19□□□□□ -2.06
HOXA10P31260 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HOXA10P31260 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HOXA10P31260 Y_RNA.224-201ENST00000364308 111 ntBASIC2.18□□□□□ -2.06
HOXA10P31260 Y_RNA.532-201ENST00000384590 113 ntBASIC2.18□□□□□ -2.06
HOXA10P31260 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
HOXA10P31260 RNU6-807P-201ENST00000516805 107 ntBASIC2.18□□□□□ -2.06
HOXA10P31260 MIR4529-201ENST00000578110 78 ntBASIC2.18□□□□□ -2.06
HOXA10P31260 SNORA4-201ENST00000584302 138 ntBASIC2.18□□□□□ -2.06
HOXA10P31260 AL357312.1-201ENST00000603879 298 ntBASIC2.18□□□□□ -2.06
HOXA10P31260 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA10P31260 SNORA16B-201ENST00000364674 135 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 SNORA72.6-201ENST00000384520 129 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 MIR563-201ENST00000385080 79 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HOXA10P31260 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 AC244023.1-201ENST00000426884 112 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 RNU6-634P-201ENST00000459134 106 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 AC005908.1-201ENST00000468701 347 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 AC055731.1-201ENST00000474387 401 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 RNU6-448P-201ENST00000517052 107 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 AC242498.1-201ENST00000604134 111 ntBASIC2.17□□□□□ -2.06
HOXA10P31260 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXA10P31260 Y_RNA.264-201ENST00000364665 102 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 RNU6-360P-201ENST00000390944 104 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 RNA5SP292-201ENST00000390974 118 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 AC009474.2-201ENST00000451383 136 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 TRMT112P2-201ENST00000512910 132 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 RNU7-41P-201ENST00000515917 61 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 RNU6-1108P-201ENST00000516308 104 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 RNU6-687P-201ENST00000516443 89 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 SNORA18.5-201ENST00000516616 101 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 MIR4536-1-201ENST00000583537 88 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 AC012493.3-201ENST00000604494 112 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 MIR502-201ENST00000606349 86 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 U1.36-201ENST00000620684 176 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.16□□□□□ -2.06
HOXA10P31260 SNORD36A-201ENST00000362874 73 ntBASIC2.15□□□□□ -2.07
HOXA10P31260 MIR1265-201ENST00000408444 86 ntBASIC2.15□□□□□ -2.07
HOXA10P31260 AC023790.1-201ENST00000482174 347 ntBASIC2.15□□□□□ -2.07
HOXA10P31260 Y_RNA.681-201ENST00000516445 113 ntBASIC2.15□□□□□ -2.07
HOXA10P31260 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXA10P31260 Y_RNA.119-201ENST00000363301 96 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 RNA5SP48-201ENST00000363969 126 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 SNORA16.1-201ENST00000364597 132 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 Y_RNA.340-201ENST00000365330 92 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 SNORD77.2-201ENST00000391045 68 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 RNU6-1254P-201ENST00000391266 104 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 RNA5SP100-201ENST00000410903 110 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 RNA5SP59-201ENST00000410922 110 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 HSPE1P24-201ENST00000450782 238 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 RNU6-75P-201ENST00000515944 104 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 RNU6-322P-201ENST00000516010 103 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 PRELID3BP2-201ENST00000605362 201 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.14□□□□□ -2.07
HOXA10P31260 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 1125.6 ms