Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
PTX3P26022 RNU6-32P-201ENST00000383948 107 ntBASIC1.3□□□□□ -2.2
PTX3P26022 RNU6-13P-201ENST00000384248 107 ntBASIC1.3□□□□□ -2.2
PTX3P26022 RNU6-12P-201ENST00000384604 107 ntBASIC1.3□□□□□ -2.2
PTX3P26022 RNU6-41P-201ENST00000384741 107 ntBASIC1.3□□□□□ -2.2
PTX3P26022 RNU4-83P-201ENST00000410863 133 ntBASIC1.3□□□□□ -2.2
PTX3P26022 FABP5P4-201ENST00000437203 171 ntBASIC1.3□□□□□ -2.2
PTX3P26022 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.3□□□□□ -2.2
PTX3P26022 RNU6-1194P-201ENST00000516208 104 ntBASIC1.3□□□□□ -2.2
PTX3P26022 MIR4676-201ENST00000583078 72 ntBASIC1.3□□□□□ -2.2
PTX3P26022 U6.109-201ENST00000636749 87 ntBASIC1.3□□□□□ -2.2
PTX3P26022 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PTX3P26022 HSBP1P2-201ENST00000299671 229 ntBASIC1.29□□□□□ -2.2
PTX3P26022 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
PTX3P26022 RNU6-765P-201ENST00000516916 99 ntBASIC1.29□□□□□ -2.2
PTX3P26022 RNU6-537P-201ENST00000517277 103 ntBASIC1.29□□□□□ -2.2
PTX3P26022 MIR3613-201ENST00000579844 87 ntBASIC1.29□□□□□ -2.2
PTX3P26022 MIR4439-201ENST00000583746 80 ntBASIC1.29□□□□□ -2.2
PTX3P26022 AC020891.4-201ENST00000605745 93 ntBASIC1.29□□□□□ -2.2
PTX3P26022 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
PTX3P26022 AL136317.1-201ENST00000612653 226 ntBASIC1.29□□□□□ -2.2
PTX3P26022 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
PTX3P26022 AL353997.5-201ENST00000618886 171 ntBASIC1.29□□□□□ -2.2
PTX3P26022 RNU4-58P-201ENST00000363192 141 ntBASIC1.28□□□□□ -2.2
PTX3P26022 Y_RNA.119-201ENST00000363301 96 ntBASIC1.28□□□□□ -2.2
PTX3P26022 SNORD45B-201ENST00000364617 72 ntBASIC1.28□□□□□ -2.2
PTX3P26022 MIR1827-201ENST00000408549 66 ntBASIC1.28□□□□□ -2.2
PTX3P26022 SCARNA23-201ENST00000516060 130 ntBASIC1.28□□□□□ -2.2
PTX3P26022 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
PTX3P26022 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
PTX3P26022 RNU6-369P-201ENST00000362515 102 ntBASIC1.27□□□□□ -2.21
PTX3P26022 RNU6-403P-201ENST00000363163 104 ntBASIC1.27□□□□□ -2.21
PTX3P26022 Y_RNA.140-201ENST00000363474 103 ntBASIC1.27□□□□□ -2.21
PTX3P26022 MIR590-201ENST00000385008 97 ntBASIC1.27□□□□□ -2.21
PTX3P26022 MIR100-201ENST00000385259 80 ntBASIC1.27□□□□□ -2.21
PTX3P26022 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
PTX3P26022 MIR938-201ENST00000401216 83 ntBASIC1.27□□□□□ -2.21
PTX3P26022 SNORD92-201ENST00000585078 85 ntBASIC1.27□□□□□ -2.21
PTX3P26022 AC104984.5-201ENST00000586878 94 ntBASIC1.27□□□□□ -2.21
PTX3P26022 MIR6082-201ENST00000613604 109 ntBASIC1.27□□□□□ -2.21
PTX3P26022 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.27□□□□□ -2.21
PTX3P26022 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
PTX3P26022 SNORA17.3-201ENST00000391159 129 ntBASIC1.26□□□□□ -2.21
PTX3P26022 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.26□□□□□ -2.21
PTX3P26022 U7.7-201ENST00000459276 60 ntBASIC1.26□□□□□ -2.21
PTX3P26022 RNU6-977P-201ENST00000516411 103 ntBASIC1.26□□□□□ -2.21
PTX3P26022 RNU6-1110P-201ENST00000516462 101 ntBASIC1.26□□□□□ -2.21
PTX3P26022 RNU6-158P-201ENST00000517104 100 ntBASIC1.26□□□□□ -2.21
PTX3P26022 MIR4804-201ENST00000581683 73 ntBASIC1.26□□□□□ -2.21
PTX3P26022 RNU6-90P-201ENST00000606352 106 ntBASIC1.26□□□□□ -2.21
PTX3P26022 MIR8066-201ENST00000617280 78 ntBASIC1.26□□□□□ -2.21
PTX3P26022 Y_RNA.93-201ENST00000363066 109 ntBASIC1.25□□□□□ -2.21
PTX3P26022 RNU6-364P-201ENST00000384387 107 ntBASIC1.25□□□□□ -2.21
PTX3P26022 Y_RNA.495-201ENST00000384435 112 ntBASIC1.25□□□□□ -2.21
PTX3P26022 SNORA72.6-201ENST00000384520 129 ntBASIC1.25□□□□□ -2.21
PTX3P26022 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
PTX3P26022 SNORA19.1-201ENST00000410656 129 ntBASIC1.25□□□□□ -2.21
PTX3P26022 AC004941.2-201ENST00000427009 228 ntBASIC1.25□□□□□ -2.21
PTX3P26022 RNU1-123P-201ENST00000458950 160 ntBASIC1.25□□□□□ -2.21
PTX3P26022 Y_RNA.659-201ENST00000515994 113 ntBASIC1.25□□□□□ -2.21
PTX3P26022 RNU7-156P-201ENST00000517214 74 ntBASIC1.25□□□□□ -2.21
PTX3P26022 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.25□□□□□ -2.21
PTX3P26022 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
PTX3P26022 Y_RNA.96-201ENST00000363092 109 ntBASIC1.24□□□□□ -2.21
PTX3P26022 SNORD114-24-201ENST00000365029 72 ntBASIC1.24□□□□□ -2.21
PTX3P26022 MIR548G-201ENST00000408442 89 ntBASIC1.24□□□□□ -2.21
PTX3P26022 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
PTX3P26022 AC015818.7-201ENST00000428754 109 ntBASIC1.24□□□□□ -2.21
PTX3P26022 AC087499.7-201ENST00000441958 109 ntBASIC1.24□□□□□ -2.21
PTX3P26022 SNORA25.16-201ENST00000516741 121 ntBASIC1.24□□□□□ -2.21
PTX3P26022 MTND5P40-201ENST00000559945 246 ntBASIC1.24□□□□□ -2.21
PTX3P26022 MIR4500-201ENST00000579472 76 ntBASIC1.24□□□□□ -2.21
PTX3P26022 AC090897.1-201ENST00000580909 226 ntBASIC1.24□□□□□ -2.21
PTX3P26022 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PTX3P26022 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
PTX3P26022 Y_RNA.13-201ENST00000362403 112 ntBASIC1.23□□□□□ -2.21
PTX3P26022 Y_RNA.42-201ENST00000362660 108 ntBASIC1.23□□□□□ -2.21
PTX3P26022 Y_RNA.247-201ENST00000364500 92 ntBASIC1.23□□□□□ -2.21
PTX3P26022 RNU7-56P-201ENST00000458744 62 ntBASIC1.23□□□□□ -2.21
PTX3P26022 RNU6-168P-201ENST00000516189 101 ntBASIC1.23□□□□□ -2.21
PTX3P26022 RNU6-531P-201ENST00000516694 104 ntBASIC1.23□□□□□ -2.21
PTX3P26022 MIR4421-201ENST00000578133 69 ntBASIC1.23□□□□□ -2.21
PTX3P26022 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
PTX3P26022 MIR2052-201ENST00000636055 55 ntBASIC1.23□□□□□ -2.21
PTX3P26022 Y_RNA.95-201ENST00000363079 95 ntBASIC1.22□□□□□ -2.21
PTX3P26022 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PTX3P26022 RNU6-571P-201ENST00000384128 107 ntBASIC1.22□□□□□ -2.21
PTX3P26022 RNU1-119P-201ENST00000391122 165 ntBASIC1.22□□□□□ -2.21
PTX3P26022 MIR942-201ENST00000401111 86 ntBASIC1.22□□□□□ -2.21
PTX3P26022 SPINT5P-201ENST00000448174 155 ntBASIC1.22□□□□□ -2.21
PTX3P26022 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.22□□□□□ -2.21
PTX3P26022 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
PTX3P26022 AP001318.4-201ENST00000616637 121 ntBASIC1.22□□□□□ -2.21
PTX3P26022 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
PTX3P26022 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.21
PTX3P26022 RNU6-170P-201ENST00000362832 104 ntBASIC1.21□□□□□ -2.22
PTX3P26022 Y_RNA.107-201ENST00000363190 121 ntBASIC1.21□□□□□ -2.22
PTX3P26022 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
PTX3P26022 Y_RNA.466-201ENST00000384294 113 ntBASIC1.21□□□□□ -2.22
PTX3P26022 MIR520F-201ENST00000384824 87 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms