Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 RNU6-850P-201ENST00000516934 103 ntBASIC2.12□□□□□ -2.07
PTPRAP18433 MIR4713-201ENST00000582691 75 ntBASIC2.12□□□□□ -2.07
PTPRAP18433 MIR4781-201ENST00000585250 76 ntBASIC2.12□□□□□ -2.07
PTPRAP18433 MIR8074-201ENST00000615081 81 ntBASIC2.12□□□□□ -2.07
PTPRAP18433 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTPRAP18433 Y_RNA.119-201ENST00000363301 96 ntBASIC2.11□□□□□ -2.07
PTPRAP18433 BX276092.1-201ENST00000427368 251 ntBASIC2.11□□□□□ -2.07
PTPRAP18433 AC093729.1-201ENST00000513074 128 ntBASIC2.11□□□□□ -2.07
PTPRAP18433 MIR4255-201ENST00000579351 72 ntBASIC2.11□□□□□ -2.07
PTPRAP18433 MIR6516-201ENST00000630554 81 ntBASIC2.11□□□□□ -2.07
PTPRAP18433 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTPRAP18433 MT-TN-201ENST00000387400 73 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 RNU4-62P-201ENST00000410125 130 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.1□□□□□ -2.07
PTPRAP18433 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 AP003716.2-201ENST00000528260 108 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 MIR4299-201ENST00000577899 72 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 MIR8063-201ENST00000621930 81 ntBASIC2.1□□□□□ -2.07
PTPRAP18433 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PTPRAP18433 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTPRAP18433 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
PTPRAP18433 Y_RNA.94-201ENST00000363068 106 ntBASIC2.09□□□□□ -2.07
PTPRAP18433 MIR1185-1-201ENST00000408598 86 ntBASIC2.09□□□□□ -2.07
PTPRAP18433 AC245517.4-201ENST00000448601 281 ntBASIC2.09□□□□□ -2.07
PTPRAP18433 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
PTPRAP18433 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.09□□□□□ -2.07
PTPRAP18433 SNORD115-37-201ENST00000363768 82 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 Y_RNA.226-201ENST00000364337 114 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 RNU6-654P-201ENST00000364373 107 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 RNU6-1296P-201ENST00000383879 107 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 RNU6-571P-201ENST00000384128 107 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PTPRAP18433 RNA5SP95-201ENST00000410319 137 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 AP1B1P2-201ENST00000416196 106 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 SNORD4B-201ENST00000459083 72 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 RNU7-153P-201ENST00000516455 62 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 MIR4303-201ENST00000581299 66 ntBASIC2.08□□□□□ -2.08
PTPRAP18433 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTPRAP18433 MIR103A2-201ENST00000362154 78 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 RNU4-32P-201ENST00000363404 141 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 SNORA67.5-201ENST00000391036 107 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 AC005908.1-201ENST00000468701 347 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 RPL30P7-201ENST00000479312 323 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 AL133373.1-201ENST00000497098 94 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 AC019288.1-201ENST00000557918 224 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 AC140658.3-201ENST00000567603 271 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
PTPRAP18433 MT-TF-201ENST00000387314 71 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 RNU6-321P-201ENST00000410912 106 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 RNU7-85P-201ENST00000458851 63 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 AC023790.1-201ENST00000482174 347 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 MIR4712-201ENST00000583750 82 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 MIR6840-201ENST00000611937 71 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
PTPRAP18433 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PTPRAP18433 AC008163.1-202ENST00000636004 2889 ntBASIC2.05□□□□□ -2.08
PTPRAP18433 RNA5SP264-201ENST00000363115 107 ntBASIC2.05□□□□□ -2.08
PTPRAP18433 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
PTPRAP18433 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
PTPRAP18433 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
PTPRAP18433 AC019176.1-201ENST00000518519 225 ntBASIC2.05□□□□□ -2.08
PTPRAP18433 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
PTPRAP18433 AL512598.1-201ENST00000610158 273 ntBASIC2.05□□□□□ -2.08
PTPRAP18433 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.05□□□□□ -2.08
PTPRAP18433 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PTPRAP18433 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PTPRAP18433 MIR377-201ENST00000362145 69 ntBASIC2.04□□□□□ -2.08
PTPRAP18433 SNORA16.1-201ENST00000364597 132 ntBASIC2.04□□□□□ -2.08
PTPRAP18433 MIR1236-201ENST00000408340 102 ntBASIC2.04□□□□□ -2.08
PTPRAP18433 Y_RNA.648-201ENST00000459455 110 ntBASIC2.04□□□□□ -2.08
PTPRAP18433 RNU11-2P-201ENST00000516898 142 ntBASIC2.04□□□□□ -2.08
PTPRAP18433 MIR502-201ENST00000606349 86 ntBASIC2.04□□□□□ -2.08
PTPRAP18433 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
PTPRAP18433 MIR302D-201ENST00000362275 68 ntBASIC2.03□□□□□ -2.08
PTPRAP18433 MIR4662A-201ENST00000637499 67 ntBASIC2.03□□□□□ -2.08
PTPRAP18433 AL161722.3-201ENST00000605789 2983 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 RNU6-776P-201ENST00000364403 104 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 RNU6-1022P-201ENST00000365049 104 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 MIR516A2-201ENST00000384888 90 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 MIR516A1-201ENST00000385033 90 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 snoU13.9-201ENST00000458927 103 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 snoU13.11-201ENST00000459219 104 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 RNU6-531P-201ENST00000516694 104 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 SNORA25.16-201ENST00000516741 121 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 MIR4491-201ENST00000581087 68 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 AL359821.1-201ENST00000605519 182 ntBASIC2.02□□□□□ -2.09
PTPRAP18433 SNORD1A-201ENST00000364968 72 ntBASIC2.01□□□□□ -2.09
PTPRAP18433 SNORA72.6-201ENST00000384520 129 ntBASIC2.01□□□□□ -2.09
PTPRAP18433 Y_RNA.588-201ENST00000391254 102 ntBASIC2.01□□□□□ -2.09
PTPRAP18433 MIR889-201ENST00000401280 79 ntBASIC2.01□□□□□ -2.09
PTPRAP18433 SNORD93-201ENST00000408813 74 ntBASIC2.01□□□□□ -2.09
PTPRAP18433 SNORA25.13-201ENST00000516395 103 ntBASIC2.01□□□□□ -2.09
PTPRAP18433 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
PTPRAP18433 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
PTPRAP18433 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms