Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CD74P04233 AC138869.1-201ENST00000568623 124 ntBASIC-0.11□□□□□ -2.43
CD74P04233 AC098479.1-201ENST00000609225 154 ntBASIC-0.11□□□□□ -2.43
CD74P04233 RNU6-929P-201ENST00000384429 107 ntBASIC-0.12□□□□□ -2.43
CD74P04233 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.12□□□□□ -2.43
CD74P04233 RNA5SP236-201ENST00000516169 116 ntBASIC-0.12□□□□□ -2.43
CD74P04233 RNU7-161P-201ENST00000517289 62 ntBASIC-0.12□□□□□ -2.43
CD74P04233 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
CD74P04233 SNORA70.25-201ENST00000612741 95 ntBASIC-0.12□□□□□ -2.43
CD74P04233 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
CD74P04233 SNORD114-10-201ENST00000363409 72 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.13□□□□□ -2.43
CD74P04233 AC244505.6-201ENST00000452829 130 ntBASIC-0.13□□□□□ -2.43
CD74P04233 RNU7-164P-201ENST00000459221 62 ntBASIC-0.13□□□□□ -2.43
CD74P04233 MIR4500-201ENST00000579472 76 ntBASIC-0.13□□□□□ -2.43
CD74P04233 MIR548H5-201ENST00000580314 60 ntBASIC-0.13□□□□□ -2.43
CD74P04233 AC021443.1-201ENST00000604478 211 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.13□□□□□ -2.43
CD74P04233 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.14□□□□□ -2.43
CD74P04233 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.14□□□□□ -2.43
CD74P04233 RNU6-818P-201ENST00000364837 108 ntBASIC-0.14□□□□□ -2.43
CD74P04233 RNU6-652P-201ENST00000365488 107 ntBASIC-0.14□□□□□ -2.43
CD74P04233 RNU6-429P-201ENST00000384582 108 ntBASIC-0.14□□□□□ -2.43
CD74P04233 MIR501-201ENST00000390204 84 ntBASIC-0.14□□□□□ -2.43
CD74P04233 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.14□□□□□ -2.43
CD74P04233 RNU6-782P-201ENST00000516852 104 ntBASIC-0.14□□□□□ -2.43
CD74P04233 AC138907.4-201ENST00000570107 226 ntBASIC-0.14□□□□□ -2.43
CD74P04233 AL360085.1-201ENST00000604713 532 ntBASIC-0.14□□□□□ -2.43
CD74P04233 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.15□□□□□ -2.43
CD74P04233 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.15□□□□□ -2.43
CD74P04233 MIR1270-201ENST00000459320 83 ntBASIC-0.15□□□□□ -2.43
CD74P04233 MIR3128-201ENST00000581957 66 ntBASIC-0.15□□□□□ -2.43
CD74P04233 AL162376.1-201ENST00000624117 175 ntBASIC-0.15□□□□□ -2.43
CD74P04233 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.16□□□□□ -2.44
CD74P04233 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.16□□□□□ -2.44
CD74P04233 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
CD74P04233 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
CD74P04233 RNU6-738P-201ENST00000384531 106 ntBASIC-0.16□□□□□ -2.44
CD74P04233 MIR635-201ENST00000384830 98 ntBASIC-0.16□□□□□ -2.44
CD74P04233 RNU6-269P-201ENST00000391077 97 ntBASIC-0.16□□□□□ -2.44
CD74P04233 RNU6-918P-201ENST00000391219 106 ntBASIC-0.16□□□□□ -2.44
CD74P04233 MIR892B-201ENST00000401279 77 ntBASIC-0.16□□□□□ -2.44
CD74P04233 MTATP6P21-201ENST00000440681 189 ntBASIC-0.16□□□□□ -2.44
CD74P04233 RNU7-123P-201ENST00000515911 60 ntBASIC-0.16□□□□□ -2.44
CD74P04233 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.16□□□□□ -2.44
CD74P04233 MIR5706-201ENST00000579841 80 ntBASIC-0.16□□□□□ -2.44
CD74P04233 AC011603.4-201ENST00000611325 277 ntBASIC-0.16□□□□□ -2.44
CD74P04233 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
CD74P04233 MIR6844-201ENST00000637122 62 ntBASIC-0.16□□□□□ -2.44
CD74P04233 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNU6-508P-201ENST00000363231 103 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNA5SP403-201ENST00000363598 108 ntBASIC-0.17□□□□□ -2.44
CD74P04233 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNU6-47P-201ENST00000383866 107 ntBASIC-0.17□□□□□ -2.44
CD74P04233 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.17□□□□□ -2.44
CD74P04233 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.17□□□□□ -2.44
CD74P04233 MIR599-201ENST00000385069 95 ntBASIC-0.17□□□□□ -2.44
CD74P04233 MIR1302-3-201ENST00000408128 138 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNU6-588P-201ENST00000410281 105 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNA5SP163-201ENST00000410304 99 ntBASIC-0.17□□□□□ -2.44
CD74P04233 MIR1912-201ENST00000410389 80 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNU4-69P-201ENST00000410677 143 ntBASIC-0.17□□□□□ -2.44
CD74P04233 BX276092.1-201ENST00000427368 251 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNU7-159P-201ENST00000459284 62 ntBASIC-0.17□□□□□ -2.44
CD74P04233 TRAJ51-201ENST00000504127 63 ntBASIC-0.17□□□□□ -2.44
CD74P04233 AC107027.2-201ENST00000512197 115 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNU4-71P-201ENST00000516258 113 ntBASIC-0.17□□□□□ -2.44
CD74P04233 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.17□□□□□ -2.44
CD74P04233 IGLVI-20-201ENST00000519296 130 ntBASIC-0.17□□□□□ -2.44
CD74P04233 RNU7-10P-201ENST00000607194 63 ntBASIC-0.17□□□□□ -2.44
CD74P04233 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.18□□□□□ -2.44
CD74P04233 RNU6-35P-201ENST00000384530 107 ntBASIC-0.18□□□□□ -2.44
CD74P04233 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.18□□□□□ -2.44
CD74P04233 MIR106A-201ENST00000384870 81 ntBASIC-0.18□□□□□ -2.44
CD74P04233 MIR206-201ENST00000384872 86 ntBASIC-0.18□□□□□ -2.44
CD74P04233 MIR568-201ENST00000385036 95 ntBASIC-0.18□□□□□ -2.44
CD74P04233 SNORA75.5-201ENST00000391291 81 ntBASIC-0.18□□□□□ -2.44
CD74P04233 SNORD58.1-201ENST00000391313 66 ntBASIC-0.18□□□□□ -2.44
CD74P04233 MTCYBP9-201ENST00000431021 303 ntBASIC-0.18□□□□□ -2.44
CD74P04233 RNU7-48P-201ENST00000458875 63 ntBASIC-0.18□□□□□ -2.44
CD74P04233 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.18□□□□□ -2.44
CD74P04233 RNU6-111P-201ENST00000517179 105 ntBASIC-0.18□□□□□ -2.44
CD74P04233 AL670379.3-201ENST00000605040 251 ntBASIC-0.18□□□□□ -2.44
CD74P04233 RNU6-161P-201ENST00000363051 106 ntBASIC-0.19□□□□□ -2.44
CD74P04233 SNORA20.1-201ENST00000364790 130 ntBASIC-0.19□□□□□ -2.44
CD74P04233 RNU6-302P-201ENST00000365249 107 ntBASIC-0.19□□□□□ -2.44
CD74P04233 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.19□□□□□ -2.44
CD74P04233 RNU2-60P-201ENST00000517290 128 ntBASIC-0.19□□□□□ -2.44
CD74P04233 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.19□□□□□ -2.44
CD74P04233 MIR4743-201ENST00000584576 69 ntBASIC-0.19□□□□□ -2.44
CD74P04233 MIR548AD-201ENST00000584780 82 ntBASIC-0.19□□□□□ -2.44
CD74P04233 AC009779.6-201ENST00000603972 165 ntBASIC-0.19□□□□□ -2.44
CD74P04233 U7.6-201ENST00000610841 64 ntBASIC-0.19□□□□□ -2.44
CD74P04233 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
CD74P04233 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms