Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-919P-201ENST00000516731 104 ntBASIC0.86□□□□□ -2.27
PRKNO60260 Y_RNA.773-201ENST00000607168 90 ntBASIC0.86□□□□□ -2.27
PRKNO60260 MIR1255B1-201ENST00000636325 63 ntBASIC0.86□□□□□ -2.27
PRKNO60260 MIR1-1-201ENST00000362147 71 ntBASIC0.85□□□□□ -2.27
PRKNO60260 Y_RNA.85-201ENST00000363014 111 ntBASIC0.85□□□□□ -2.27
PRKNO60260 SNORD114-24-201ENST00000365029 72 ntBASIC0.85□□□□□ -2.27
PRKNO60260 RNY1P13-201ENST00000365030 105 ntBASIC0.85□□□□□ -2.27
PRKNO60260 RNU6-616P-201ENST00000384353 107 ntBASIC0.85□□□□□ -2.27
PRKNO60260 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
PRKNO60260 RNY4P18-201ENST00000391107 89 ntBASIC0.85□□□□□ -2.27
PRKNO60260 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.85□□□□□ -2.27
PRKNO60260 RPS26P5-201ENST00000418544 335 ntBASIC0.85□□□□□ -2.27
PRKNO60260 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.85□□□□□ -2.27
PRKNO60260 SNORD67.1-201ENST00000516618 108 ntBASIC0.85□□□□□ -2.27
PRKNO60260 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
PRKNO60260 SNORA63.5-201ENST00000363548 123 ntBASIC0.84□□□□□ -2.27
PRKNO60260 RNU6-949P-201ENST00000384040 107 ntBASIC0.84□□□□□ -2.27
PRKNO60260 MIR598-201ENST00000384868 97 ntBASIC0.84□□□□□ -2.27
PRKNO60260 MIR1257-201ENST00000408490 117 ntBASIC0.84□□□□□ -2.27
PRKNO60260 AL035461.1-201ENST00000421490 332 ntBASIC0.84□□□□□ -2.27
PRKNO60260 RNU7-185P-201ENST00000459215 60 ntBASIC0.84□□□□□ -2.27
PRKNO60260 RPL39P34-201ENST00000477141 156 ntBASIC0.84□□□□□ -2.27
PRKNO60260 RNU6-412P-201ENST00000516434 106 ntBASIC0.84□□□□□ -2.27
PRKNO60260 RNU7-137P-201ENST00000516788 62 ntBASIC0.84□□□□□ -2.27
PRKNO60260 AC020891.4-201ENST00000605745 93 ntBASIC0.84□□□□□ -2.27
PRKNO60260 AC103810.9-201ENST00000606688 112 ntBASIC0.84□□□□□ -2.27
PRKNO60260 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.84□□□□□ -2.27
PRKNO60260 PVT1_3.1-201ENST00000620853 95 ntBASIC0.84□□□□□ -2.27
PRKNO60260 AL162726.3-218ENST00000636401 95 ntBASIC0.84□□□□□ -2.27
PRKNO60260 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
PRKNO60260 RNU6-1107P-201ENST00000364817 104 ntBASIC0.83□□□□□ -2.28
PRKNO60260 MIR206-201ENST00000384872 86 ntBASIC0.83□□□□□ -2.28
PRKNO60260 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
PRKNO60260 MIR1827-201ENST00000408549 66 ntBASIC0.83□□□□□ -2.28
PRKNO60260 SNORD93-201ENST00000408813 74 ntBASIC0.83□□□□□ -2.28
PRKNO60260 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
PRKNO60260 RNU6-977P-201ENST00000516411 103 ntBASIC0.83□□□□□ -2.28
PRKNO60260 MIR4661-201ENST00000582720 75 ntBASIC0.83□□□□□ -2.28
PRKNO60260 MIR4676-201ENST00000583078 72 ntBASIC0.83□□□□□ -2.28
PRKNO60260 SNORD114-26-201ENST00000363543 72 ntBASIC0.82□□□□□ -2.28
PRKNO60260 RNU4-67P-201ENST00000364569 141 ntBASIC0.82□□□□□ -2.28
PRKNO60260 Y_RNA.309-201ENST00000365046 111 ntBASIC0.82□□□□□ -2.28
PRKNO60260 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
PRKNO60260 RNU6-44P-201ENST00000384045 107 ntBASIC0.82□□□□□ -2.28
PRKNO60260 RNU6-816P-201ENST00000390914 107 ntBASIC0.82□□□□□ -2.28
PRKNO60260 U8.15-201ENST00000390947 134 ntBASIC0.82□□□□□ -2.28
PRKNO60260 RNU6-1307P-201ENST00000391012 103 ntBASIC0.82□□□□□ -2.28
PRKNO60260 RNU6-1268P-201ENST00000391214 107 ntBASIC0.82□□□□□ -2.28
PRKNO60260 RNU6-1239P-201ENST00000391310 107 ntBASIC0.82□□□□□ -2.28
PRKNO60260 MIR1912-201ENST00000410389 80 ntBASIC0.82□□□□□ -2.28
PRKNO60260 AC096949.1-201ENST00000412047 152 ntBASIC0.82□□□□□ -2.28
PRKNO60260 AL353813.1-201ENST00000440700 253 ntBASIC0.82□□□□□ -2.28
PRKNO60260 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.82□□□□□ -2.28
PRKNO60260 RNU7-2P-201ENST00000516096 62 ntBASIC0.82□□□□□ -2.28
PRKNO60260 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.82□□□□□ -2.28
PRKNO60260 MIR6779-201ENST00000617283 64 ntBASIC0.82□□□□□ -2.28
PRKNO60260 Y_RNA.49-201ENST00000362714 112 ntBASIC0.81□□□□□ -2.28
PRKNO60260 SNORA63.4-201ENST00000362763 126 ntBASIC0.81□□□□□ -2.28
PRKNO60260 RNU6-363P-201ENST00000362895 105 ntBASIC0.81□□□□□ -2.28
PRKNO60260 SNORD114-10-201ENST00000363409 72 ntBASIC0.81□□□□□ -2.28
PRKNO60260 RNU6-755P-201ENST00000364400 103 ntBASIC0.81□□□□□ -2.28
PRKNO60260 U8.6-201ENST00000364939 135 ntBASIC0.81□□□□□ -2.28
PRKNO60260 Y_RNA.323-201ENST00000365157 109 ntBASIC0.81□□□□□ -2.28
PRKNO60260 RNU6-1335P-201ENST00000365426 107 ntBASIC0.81□□□□□ -2.28
PRKNO60260 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
PRKNO60260 Y_RNA.507-201ENST00000384500 99 ntBASIC0.81□□□□□ -2.28
PRKNO60260 MIR520F-201ENST00000384824 87 ntBASIC0.81□□□□□ -2.28
PRKNO60260 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
PRKNO60260 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.81□□□□□ -2.28
PRKNO60260 U7.7-201ENST00000459276 60 ntBASIC0.81□□□□□ -2.28
PRKNO60260 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
PRKNO60260 AC068339.1-201ENST00000526965 141 ntBASIC0.81□□□□□ -2.28
PRKNO60260 MIR5009-201ENST00000578736 100 ntBASIC0.81□□□□□ -2.28
PRKNO60260 AC105081.1-201ENST00000617727 106 ntBASIC0.81□□□□□ -2.28
PRKNO60260 Y_RNA.36-201ENST00000362602 112 ntBASIC0.8□□□□□ -2.28
PRKNO60260 Y_RNA.81-201ENST00000362997 102 ntBASIC0.8□□□□□ -2.28
PRKNO60260 RNU6-403P-201ENST00000363163 104 ntBASIC0.8□□□□□ -2.28
PRKNO60260 SNORD115-35-201ENST00000365122 82 ntBASIC0.8□□□□□ -2.28
PRKNO60260 RNU6-1014P-201ENST00000383940 103 ntBASIC0.8□□□□□ -2.28
PRKNO60260 Y_RNA.448-201ENST00000384185 108 ntBASIC0.8□□□□□ -2.28
PRKNO60260 MIR125B2-201ENST00000385128 89 ntBASIC0.8□□□□□ -2.28
PRKNO60260 RNU6-1321P-201ENST00000390905 107 ntBASIC0.8□□□□□ -2.28
PRKNO60260 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
PRKNO60260 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
PRKNO60260 RNU6-521P-201ENST00000516663 105 ntBASIC0.8□□□□□ -2.28
PRKNO60260 MIR4804-201ENST00000581683 73 ntBASIC0.8□□□□□ -2.28
PRKNO60260 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
PRKNO60260 uc_338.28-201ENST00000612082 187 ntBASIC0.8□□□□□ -2.28
PRKNO60260 AL136317.1-201ENST00000612653 226 ntBASIC0.8□□□□□ -2.28
PRKNO60260 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
PRKNO60260 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
PRKNO60260 Y_RNA.155-201ENST00000363632 101 ntBASIC0.79□□□□□ -2.28
PRKNO60260 RNU6-409P-201ENST00000384114 104 ntBASIC0.79□□□□□ -2.28
PRKNO60260 RNU6-364P-201ENST00000384387 107 ntBASIC0.79□□□□□ -2.28
PRKNO60260 RNU6-106P-201ENST00000384405 107 ntBASIC0.79□□□□□ -2.28
PRKNO60260 RNU6-679P-201ENST00000391003 106 ntBASIC0.79□□□□□ -2.28
PRKNO60260 MIR938-201ENST00000401216 83 ntBASIC0.79□□□□□ -2.28
PRKNO60260 RNU6-554P-201ENST00000410466 106 ntBASIC0.79□□□□□ -2.28
PRKNO60260 SNORA7.5-201ENST00000410672 110 ntBASIC0.79□□□□□ -2.28
PRKNO60260 RNU6-733P-201ENST00000410759 104 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 1939.6 ms