Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNU6-472P-201ENST00000384299 107 ntBASIC-0.4□□□□□ -2.47
CLDN3O15551 RNU2-35P-201ENST00000516446 142 ntBASIC-0.4□□□□□ -2.47
CLDN3O15551 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 RNU6-867P-201ENST00000364956 107 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 RNY4P28-201ENST00000365281 93 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 SNORD114-12-201ENST00000365400 75 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 RNU6-46P-201ENST00000383860 107 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 SNORA75.1-201ENST00000391130 148 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 MTATP8P1-201ENST00000467115 207 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 TRAJ51-201ENST00000504127 63 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 MTND1P19-201ENST00000511780 315 ntBASIC-0.41□□□□□ -2.48
CLDN3O15551 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.42□□□□□ -2.48
CLDN3O15551 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 MIR599-201ENST00000385069 95 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 SNORD110-201ENST00000408189 75 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.42□□□□□ -2.48
CLDN3O15551 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 MIR4500-201ENST00000579472 76 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 MIR6514-201ENST00000622549 70 ntBASIC-0.42□□□□□ -2.48
CLDN3O15551 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.43□□□□□ -2.48
CLDN3O15551 RNU6-275P-201ENST00000364910 107 ntBASIC-0.43□□□□□ -2.48
CLDN3O15551 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.43□□□□□ -2.48
CLDN3O15551 MIR1270-201ENST00000459320 83 ntBASIC-0.43□□□□□ -2.48
CLDN3O15551 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.43□□□□□ -2.48
CLDN3O15551 AC044792.1-201ENST00000593294 196 ntBASIC-0.43□□□□□ -2.48
CLDN3O15551 AC011603.4-201ENST00000611325 277 ntBASIC-0.43□□□□□ -2.48
CLDN3O15551 RNU6-509P-201ENST00000363519 107 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 SNORD114-28-201ENST00000363610 72 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 AC006210.1-201ENST00000424882 111 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 HMGN2P22-201ENST00000427588 175 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 AC097635.1-201ENST00000450678 155 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 CR383656.4-201ENST00000546909 122 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 NAMPTP3-201ENST00000569273 224 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 AP001094.1-201ENST00000579805 193 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 MIR4308-201ENST00000580634 81 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 MIR4645-201ENST00000583158 77 ntBASIC-0.44□□□□□ -2.48
CLDN3O15551 RNU4-69P-201ENST00000410677 143 ntBASIC-0.45□□□□□ -2.48
CLDN3O15551 AL670379.3-201ENST00000605040 251 ntBASIC-0.45□□□□□ -2.48
CLDN3O15551 AC084368.1-201ENST00000620935 65 ntBASIC-0.45□□□□□ -2.48
CLDN3O15551 RNU6-865P-201ENST00000364772 107 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 MIR548I2-201ENST00000408348 149 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 RNU7-48P-201ENST00000458875 63 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 RNU6-240P-201ENST00000516098 97 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
CLDN3O15551 AC138907.4-201ENST00000570107 226 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 AC021443.1-201ENST00000604478 211 ntBASIC-0.46□□□□□ -2.48
CLDN3O15551 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 MIR106A-201ENST00000384870 81 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 MIR206-201ENST00000384872 86 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 MIR876-201ENST00000401147 81 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 MIR548H3-201ENST00000408771 118 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 BX276092.1-201ENST00000427368 251 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 RNA5SP484-201ENST00000458857 111 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 RNU7-164P-201ENST00000459221 62 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
CLDN3O15551 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.47□□□□□ -2.48
CLDN3O15551 U6.106-201ENST00000636360 105 ntBASIC-0.47□□□□□ -2.48
CLDN3O15551 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 RNU6-768P-201ENST00000384683 107 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 RNU2-38P-201ENST00000410856 79 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 MTATP6P21-201ENST00000440681 189 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 MIR3920-201ENST00000581751 86 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
CLDN3O15551 MIR148A-201ENST00000362215 68 ntBASIC-0.49□□□□□ -2.49
CLDN3O15551 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.49□□□□□ -2.49
CLDN3O15551 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.49□□□□□ -2.49
CLDN3O15551 SNORA32.3-201ENST00000384772 121 ntBASIC-0.49□□□□□ -2.49
CLDN3O15551 SNORD127-201ENST00000458892 86 ntBASIC-0.49□□□□□ -2.49
CLDN3O15551 SNORA25.13-201ENST00000516395 103 ntBASIC-0.49□□□□□ -2.49
CLDN3O15551 MIR4802-201ENST00000581881 80 ntBASIC-0.49□□□□□ -2.49
CLDN3O15551 RNU6-818P-201ENST00000364837 108 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 MIR516B1-201ENST00000385211 90 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 MIR519A1-201ENST00000385257 85 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 AC109327.2-201ENST00000448339 378 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 RNU7-123P-201ENST00000515911 60 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 MIR5589-201ENST00000579442 60 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 MIR3666-201ENST00000607845 111 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 AP001362.1-201ENST00000625165 124 ntBASIC-0.5□□□□□ -2.49
CLDN3O15551 RNU6-797P-201ENST00000363101 109 ntBASIC-0.51□□□□□ -2.49
CLDN3O15551 MIR548F4-201ENST00000408515 105 ntBASIC-0.51□□□□□ -2.49
CLDN3O15551 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.51□□□□□ -2.49
CLDN3O15551 MTND2P23-201ENST00000422990 651 ntBASIC-0.51□□□□□ -2.49
CLDN3O15551 RNU7-74P-201ENST00000459104 62 ntBASIC-0.51□□□□□ -2.49
CLDN3O15551 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.51□□□□□ -2.49
CLDN3O15551 RNU7-13P-201ENST00000516413 62 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms