Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MIR4714-201ENST00000580728 77 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
HDAC3O15379 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HDAC3O15379 Y_RNA.13-201ENST00000362403 112 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 Y_RNA.42-201ENST00000362660 108 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 RNU6-403P-201ENST00000363163 104 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 Y_RNA.213-201ENST00000364178 111 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 Y_RNA.299-201ENST00000364973 94 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 SNORD113-1-201ENST00000365321 69 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 Y_RNA.353-201ENST00000365440 108 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 MIR518E-201ENST00000385252 88 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 RNU6-1321P-201ENST00000390905 107 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 RNU4-83P-201ENST00000410863 133 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 AC244098.3-201ENST00000424803 96 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 RNU6-406P-201ENST00000516470 107 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 AC138749.4-201ENST00000563970 127 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 MIR3163-201ENST00000581592 73 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 SNORD92-201ENST00000585078 85 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 MIR6734-201ENST00000621166 68 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 AL035470.1-201ENST00000622571 220 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 U6.109-201ENST00000636749 87 ntBASIC0.57□□□□□ -2.32
HDAC3O15379 SNORD115-19-201ENST00000363098 82 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 SNORD115-18-201ENST00000363293 82 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 SNORD115-17-201ENST00000364612 82 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 RNY1P8-201ENST00000383970 114 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 Y_RNA.448-201ENST00000384185 108 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 RNU6-22P-201ENST00000384355 107 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 SNORA72.6-201ENST00000384520 129 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 Y_RNA.549-201ENST00000384657 102 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 MIR548D2-201ENST00000384955 97 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 MIR938-201ENST00000401216 83 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 RPL39P25-201ENST00000449384 154 ntBASIC0.56□□□□□ -2.32
HDAC3O15379 RNA5SP133-201ENST00000363368 119 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 SNORD114-10-201ENST00000363409 72 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 Y_RNA.346-201ENST00000365385 112 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 RNU6-364P-201ENST00000384387 107 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 SNORA19-201ENST00000384737 128 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 MIR548A1-201ENST00000385041 97 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 SNORD77B-201ENST00000391112 67 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 AL606753.1-201ENST00000427435 87 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 AL353813.1-201ENST00000440700 253 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 RNU7-2P-201ENST00000516096 62 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 RNU6-531P-201ENST00000516694 104 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 AC011195.1-201ENST00000578177 177 ntBASIC0.55□□□□□ -2.32
HDAC3O15379 SNORD115-35-201ENST00000365122 82 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 Y_RNA.355-201ENST00000365462 98 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 Y_RNA.362-201ENST00000365518 110 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 RNU6-1117P-201ENST00000384525 104 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 MIR573-201ENST00000384964 99 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 RNU6-1168P-201ENST00000390831 104 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 RNU1-119P-201ENST00000391122 165 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 AC008267.6-201ENST00000441664 139 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 Y_RNA.649-201ENST00000459077 103 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 RNU6-521P-201ENST00000516663 105 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 MTND5P34-201ENST00000568888 325 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 MIR5000-201ENST00000577717 103 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 AL136317.1-201ENST00000612653 226 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 MIR6082-201ENST00000613604 109 ntBASIC0.54□□□□□ -2.32
HDAC3O15379 RNA5SP205-201ENST00000364653 136 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNY1P2-201ENST00000364820 117 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-42P-201ENST00000384165 107 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 Y_RNA.563-201ENST00000384707 108 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 MIR34C-201ENST00000384831 77 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-447P-201ENST00000410293 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-1118P-201ENST00000410382 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-1076P-201ENST00000410397 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-355P-201ENST00000410427 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-791P-201ENST00000410467 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-705P-201ENST00000410601 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-1100P-201ENST00000410691 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-860P-201ENST00000410860 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-1217P-201ENST00000411276 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 RNU6-785P-201ENST00000411324 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 AC025627.3-201ENST00000582078 182 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.53□□□□□ -2.32
HDAC3O15379 U6.90-201ENST00000614007 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 MIR376B-201ENST00000614515 100 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 AC022709.1-201ENST00000615967 87 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 U6.70-201ENST00000620287 104 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 U2.22-201ENST00000636441 106 ntBASIC0.53□□□□□ -2.32
HDAC3O15379 Y_RNA.119-201ENST00000363301 96 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 RNY4P6-201ENST00000363667 96 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 Y_RNA.328-201ENST00000365208 113 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HDAC3O15379 Y_RNA.508-201ENST00000384502 114 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 MIR548A3-201ENST00000385297 97 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 RNU6-1154P-201ENST00000391001 104 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 RNU6-679P-201ENST00000391003 106 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 SNORA7.5-201ENST00000410672 110 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 RNU7-48P-201ENST00000458875 63 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 RNU6-789P-201ENST00000517105 102 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 AC007012.1-201ENST00000567192 175 ntBASIC0.52□□□□□ -2.33
HDAC3O15379 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms