Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
APAF1O14727 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
APAF1O14727 RNA5SP133-201ENST00000363368 119 ntBASIC0.64□□□□□ -2.31
APAF1O14727 MIRLET7F2-201ENST00000385277 83 ntBASIC0.64□□□□□ -2.31
APAF1O14727 Y_RNA.617-201ENST00000410920 90 ntBASIC0.64□□□□□ -2.31
APAF1O14727 RN7SKP19-201ENST00000516016 252 ntBASIC0.64□□□□□ -2.31
APAF1O14727 SNORA25.16-201ENST00000516741 121 ntBASIC0.64□□□□□ -2.31
APAF1O14727 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
APAF1O14727 Y_RNA.213-201ENST00000364178 111 ntBASIC0.63□□□□□ -2.31
APAF1O14727 Y_RNA.280-201ENST00000364765 112 ntBASIC0.63□□□□□ -2.31
APAF1O14727 MIR489-201ENST00000384923 84 ntBASIC0.63□□□□□ -2.31
APAF1O14727 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
APAF1O14727 AL158147.1-201ENST00000443970 75 ntBASIC0.63□□□□□ -2.31
APAF1O14727 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
APAF1O14727 MIR3163-201ENST00000581592 73 ntBASIC0.63□□□□□ -2.31
APAF1O14727 AL359881.1-201ENST00000602916 267 ntBASIC0.63□□□□□ -2.31
APAF1O14727 U6.109-201ENST00000636749 87 ntBASIC0.63□□□□□ -2.31
APAF1O14727 MIR101-2-201ENST00000362195 79 ntBASIC0.62□□□□□ -2.31
APAF1O14727 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
APAF1O14727 RNU6-535P-201ENST00000384722 107 ntBASIC0.62□□□□□ -2.31
APAF1O14727 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
APAF1O14727 MIR6515-201ENST00000619843 57 ntBASIC0.62□□□□□ -2.31
APAF1O14727 MIR6513-201ENST00000621188 64 ntBASIC0.62□□□□□ -2.31
APAF1O14727 Y_RNA.98-201ENST00000363109 102 ntBASIC0.61□□□□□ -2.31
APAF1O14727 RNU6-429P-201ENST00000384582 108 ntBASIC0.61□□□□□ -2.31
APAF1O14727 RNU6-679P-201ENST00000391003 106 ntBASIC0.61□□□□□ -2.31
APAF1O14727 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
APAF1O14727 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.61□□□□□ -2.31
APAF1O14727 IGKV1-22-201ENST00000524313 326 ntBASIC0.61□□□□□ -2.31
APAF1O14727 AC022523.2-201ENST00000561045 150 ntBASIC0.61□□□□□ -2.31
APAF1O14727 AC138749.4-201ENST00000563970 127 ntBASIC0.61□□□□□ -2.31
APAF1O14727 RNU7-10P-201ENST00000607194 63 ntBASIC0.61□□□□□ -2.31
APAF1O14727 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.61□□□□□ -2.31
APAF1O14727 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
APAF1O14727 Y_RNA.119-201ENST00000363301 96 ntBASIC0.6□□□□□ -2.31
APAF1O14727 Y_RNA.198-201ENST00000364013 98 ntBASIC0.6□□□□□ -2.31
APAF1O14727 RNU6-291P-201ENST00000384720 107 ntBASIC0.6□□□□□ -2.31
APAF1O14727 RNU6-1104P-201ENST00000384723 104 ntBASIC0.6□□□□□ -2.31
APAF1O14727 RNU6-531P-201ENST00000516694 104 ntBASIC0.6□□□□□ -2.31
APAF1O14727 Y_RNA.56-201ENST00000362798 112 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNU6-209P-201ENST00000384118 107 ntBASIC0.59□□□□□ -2.31
APAF1O14727 SNORA40-201ENST00000388090 126 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNU6-907P-201ENST00000390924 102 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
APAF1O14727 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNU7-48P-201ENST00000458875 63 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNU7-2P-201ENST00000516096 62 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNU6-426P-201ENST00000516464 97 ntBASIC0.59□□□□□ -2.31
APAF1O14727 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.59□□□□□ -2.31
APAF1O14727 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
APAF1O14727 RNU6-1229P-201ENST00000364295 107 ntBASIC0.58□□□□□ -2.32
APAF1O14727 Y_RNA.294-201ENST00000364916 102 ntBASIC0.58□□□□□ -2.32
APAF1O14727 MIR206-201ENST00000384872 86 ntBASIC0.58□□□□□ -2.32
APAF1O14727 MIR548I1-201ENST00000408810 149 ntBASIC0.58□□□□□ -2.32
APAF1O14727 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
APAF1O14727 SNORA31.14-201ENST00000516728 116 ntBASIC0.58□□□□□ -2.32
APAF1O14727 MIR548H5-201ENST00000580314 60 ntBASIC0.58□□□□□ -2.32
APAF1O14727 AC105081.1-201ENST00000617727 106 ntBASIC0.58□□□□□ -2.32
APAF1O14727 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
APAF1O14727 Y_RNA.32-201ENST00000362589 110 ntBASIC0.57□□□□□ -2.32
APAF1O14727 RNU6-1099P-201ENST00000363533 107 ntBASIC0.57□□□□□ -2.32
APAF1O14727 MIR539-201ENST00000365690 78 ntBASIC0.57□□□□□ -2.32
APAF1O14727 Y_RNA.568-201ENST00000384742 113 ntBASIC0.57□□□□□ -2.32
APAF1O14727 MIR936-201ENST00000401264 98 ntBASIC0.57□□□□□ -2.32
APAF1O14727 RNU7-6P-201ENST00000516845 62 ntBASIC0.57□□□□□ -2.32
APAF1O14727 RNU6-255P-201ENST00000516957 105 ntBASIC0.57□□□□□ -2.32
APAF1O14727 MTND5P34-201ENST00000568888 325 ntBASIC0.57□□□□□ -2.32
APAF1O14727 MIR4639-201ENST00000584938 69 ntBASIC0.57□□□□□ -2.32
APAF1O14727 AP001362.1-201ENST00000625165 124 ntBASIC0.57□□□□□ -2.32
APAF1O14727 SNORD115-19-201ENST00000363098 82 ntBASIC0.56□□□□□ -2.32
APAF1O14727 SNORD115-18-201ENST00000363293 82 ntBASIC0.56□□□□□ -2.32
APAF1O14727 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
APAF1O14727 SNORD115-17-201ENST00000364612 82 ntBASIC0.56□□□□□ -2.32
APAF1O14727 RNU6-865P-201ENST00000364772 107 ntBASIC0.56□□□□□ -2.32
APAF1O14727 SNORD115-35-201ENST00000365122 82 ntBASIC0.56□□□□□ -2.32
APAF1O14727 Y_RNA.448-201ENST00000384185 108 ntBASIC0.56□□□□□ -2.32
APAF1O14727 Y_RNA.567-201ENST00000384736 106 ntBASIC0.56□□□□□ -2.32
APAF1O14727 RNU6-1321P-201ENST00000390905 107 ntBASIC0.56□□□□□ -2.32
APAF1O14727 RNU6-863P-201ENST00000515989 104 ntBASIC0.56□□□□□ -2.32
APAF1O14727 RNA5SP272-201ENST00000516095 111 ntBASIC0.56□□□□□ -2.32
APAF1O14727 MIR7111-201ENST00000619751 72 ntBASIC0.56□□□□□ -2.32
APAF1O14727 AC090625.1-201ENST00000357130 210 ntBASIC0.55□□□□□ -2.32
APAF1O14727 MIR518A1-201ENST00000385068 85 ntBASIC0.55□□□□□ -2.32
APAF1O14727 MIR644A-201ENST00000385262 94 ntBASIC0.55□□□□□ -2.32
APAF1O14727 MIR4711-201ENST00000578274 70 ntBASIC0.55□□□□□ -2.32
APAF1O14727 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.55□□□□□ -2.32
APAF1O14727 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.55□□□□□ -2.32
APAF1O14727 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
APAF1O14727 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
APAF1O14727 Y_RNA.506-201ENST00000384494 102 ntBASIC0.54□□□□□ -2.32
APAF1O14727 MT-TI-201ENST00000387365 69 ntBASIC0.54□□□□□ -2.32
APAF1O14727 MIR1263-201ENST00000408324 86 ntBASIC0.54□□□□□ -2.32
APAF1O14727 MTND4LP9-201ENST00000427694 174 ntBASIC0.54□□□□□ -2.32
APAF1O14727 AC138869.1-201ENST00000568623 124 ntBASIC0.54□□□□□ -2.32
APAF1O14727 PVT1_3.1-201ENST00000620853 95 ntBASIC0.54□□□□□ -2.32
APAF1O14727 Y_RNA.328-201ENST00000365208 113 ntBASIC0.53□□□□□ -2.32
APAF1O14727 RNU6-616P-201ENST00000384353 107 ntBASIC0.53□□□□□ -2.32
APAF1O14727 MIR598-201ENST00000384868 97 ntBASIC0.53□□□□□ -2.32
APAF1O14727 SCARNA16.5-201ENST00000517114 183 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 230.8 ms