Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.78-201ENST00000362970 110 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 RNU6-990P-201ENST00000364385 104 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 RPL35AP4-201ENST00000412007 102 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 RNU6-191P-201ENST00000516295 94 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 MTND3P12-201ENST00000559068 328 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.14□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 RNU6-880P-201ENST00000384526 107 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 RNU6-1228P-201ENST00000391014 107 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 SNORD19-201ENST00000391191 68 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 U3.27-201ENST00000391237 200 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 RNU6-1156P-201ENST00000410365 100 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 MIR2053-201ENST00000459295 91 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 RNU6-835P-201ENST00000516974 104 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 MTCO2P4-201ENST00000517968 247 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 AL157392.4-201ENST00000609756 345 ntBASIC-2.15□□□□□ -2.75
CPSF4LA6NMK7 RNU6-774P-201ENST00000363238 107 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.201-201ENST00000364052 96 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 RNU6-312P-201ENST00000364629 107 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 SNORD114-3-201ENST00000364969 75 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 MTND2P31-201ENST00000512602 616 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 RNU2-35P-201ENST00000516446 142 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 ELOCP32-201ENST00000548625 324 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 TPTEP1-208ENST00000636884 213 ntBASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.16□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 RNY4P6-201ENST00000363667 96 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.373-201ENST00000365600 103 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.530-201ENST00000384587 101 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 MIR34C-201ENST00000384831 77 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 MIR526A2-201ENST00000390198 65 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 RNU6-1248P-201ENST00000391096 64 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 RNU4-69P-201ENST00000410677 143 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 snoU109.3-201ENST00000459477 145 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 FGF7P4-201ENST00000509595 295 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 RNU6-1149P-201ENST00000516810 97 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 AP002392.1-201ENST00000537692 208 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 MIR4790-201ENST00000577799 79 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 AC073869.6-201ENST00000640656 341 ntBASIC-2.17□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.18□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.473-201ENST00000384333 102 ntBASIC-2.18□□□□□ -2.76
CPSF4LA6NMK7 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.18□□□□□ -2.76
CPSF4LA6NMK7 MIR1255B2-201ENST00000408618 67 ntBASIC-2.18□□□□□ -2.76
CPSF4LA6NMK7 AC082651.2-201ENST00000496833 166 ntBASIC-2.18□□□□□ -2.76
CPSF4LA6NMK7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.18□□□□□ -2.76
CPSF4LA6NMK7 U4.2-201ENST00000618561 85 ntBASIC-2.18□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 SNORA69.1-201ENST00000390904 137 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 RNU6-695P-201ENST00000391157 104 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 AC009161.1-201ENST00000417306 376 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 MIR5692C2-201ENST00000577959 77 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 AC084782.3-201ENST00000612282 578 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 U6.92-201ENST00000636464 89 ntBASIC-2.19□□□□□ -2.76
CPSF4LA6NMK7 RNU6-495P-201ENST00000362995 107 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.428-201ENST00000384078 102 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 AC138393.2-201ENST00000414742 246 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 AL593851.1-201ENST00000426171 157 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 SNRPGP8-201ENST00000454064 226 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 MIR6128-201ENST00000615528 109 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 AC007485.1-201ENST00000616755 206 ntBASIC-2.2□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.357-201ENST00000365487 109 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 RNU6-841P-201ENST00000383872 107 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 RNU6-370P-201ENST00000411008 104 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 AC019235.1-201ENST00000503847 207 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 SEPT14P8-201ENST00000508026 178 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 RNU7-110P-201ENST00000516891 62 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 RNU6-980P-201ENST00000516925 103 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 MIR5688-201ENST00000580619 83 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 AC068137.3-201ENST00000639191 341 ntBASIC-2.21□□□□□ -2.76
CPSF4LA6NMK7 RNU6-728P-201ENST00000365375 104 ntBASIC-2.22□□□□□ -2.76
CPSF4LA6NMK7 AL021368.1-201ENST00000607490 540 ntBASIC-2.22□□□□□ -2.76
CPSF4LA6NMK7 Y_RNA.2-201ENST00000362330 96 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 RNA5SP405-201ENST00000363059 114 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 RNY4P27-201ENST00000363341 96 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 RNU6-99P-201ENST00000364721 107 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.293-201ENST00000364908 93 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.299-201ENST00000364973 94 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 MRPS35P2-201ENST00000508242 191 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 RNU7-154P-201ENST00000516194 62 ntBASIC-2.23□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 288.6 ms