Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-447P-201ENST00000410293 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-355P-201ENST00000410427 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-791P-201ENST00000410467 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-705P-201ENST00000410601 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-860P-201ENST00000410860 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-785P-201ENST00000411324 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 RNU7-102P-201ENST00000458948 62 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 MIR4491-201ENST00000581087 68 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 U6.90-201ENST00000614007 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 U6.70-201ENST00000620287 104 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 U6.109-201ENST00000636749 87 ntBASIC0.99□□□□□ -2.25
MBD3L4A6NDZ8 Y_RNA.448-201ENST00000384185 108 ntBASIC0.98□□□□□ -2.25
MBD3L4A6NDZ8 MIR548A3-201ENST00000385297 97 ntBASIC0.98□□□□□ -2.25
MBD3L4A6NDZ8 MIR548I2-201ENST00000408348 149 ntBASIC0.98□□□□□ -2.25
MBD3L4A6NDZ8 Y_RNA.649-201ENST00000459077 103 ntBASIC0.98□□□□□ -2.25
MBD3L4A6NDZ8 RNU7-2P-201ENST00000516096 62 ntBASIC0.98□□□□□ -2.25
MBD3L4A6NDZ8 DEFB131E-201ENST00000532329 154 ntBASIC0.98□□□□□ -2.25
MBD3L4A6NDZ8 SNORD115-19-201ENST00000363098 82 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 SNORD115-18-201ENST00000363293 82 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 RNA5SP133-201ENST00000363368 119 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 SNORD115-17-201ENST00000364612 82 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 Y_RNA.353-201ENST00000365440 108 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 RNU6-1081P-201ENST00000384537 107 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 MIR598-201ENST00000384868 97 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 Y_RNA.588-201ENST00000391254 102 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 SNORD99-201ENST00000408612 74 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 AC096949.1-201ENST00000412047 152 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 RNU7-56P-201ENST00000458744 62 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 SNORD92-201ENST00000585078 85 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 Y_RNA.773-201ENST00000607168 90 ntBASIC0.97□□□□□ -2.25
MBD3L4A6NDZ8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.96□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-1321P-201ENST00000390905 107 ntBASIC0.96□□□□□ -2.26
MBD3L4A6NDZ8 SNORA25.16-201ENST00000516741 121 ntBASIC0.96□□□□□ -2.26
MBD3L4A6NDZ8 AC008608.1-201ENST00000603910 127 ntBASIC0.96□□□□□ -2.26
MBD3L4A6NDZ8 AL670379.3-201ENST00000605040 251 ntBASIC0.96□□□□□ -2.26
MBD3L4A6NDZ8 MIR6779-201ENST00000617283 64 ntBASIC0.96□□□□□ -2.26
MBD3L4A6NDZ8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-865P-201ENST00000364772 107 ntBASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.291-201ENST00000364886 113 ntBASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 MIR548A1-201ENST00000385041 97 ntBASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 RNU7-48P-201ENST00000458875 63 ntBASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 MTND5P34-201ENST00000568888 325 ntBASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 AC011195.1-201ENST00000578177 177 ntBASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 MIR1255B1-201ENST00000636325 63 ntBASIC0.95□□□□□ -2.26
MBD3L4A6NDZ8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 AC138749.4-201ENST00000563970 127 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 MIR548AI-201ENST00000579940 88 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 AL353765.1-201ENST00000605514 183 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 MIR6082-201ENST00000613604 109 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 MIR8066-201ENST00000617280 78 ntBASIC0.94□□□□□ -2.26
MBD3L4A6NDZ8 SNORD115-35-201ENST00000365122 82 ntBASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.344-201ENST00000365381 112 ntBASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.362-201ENST00000365518 110 ntBASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-531P-201ENST00000516694 104 ntBASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 AC007012.1-201ENST00000567192 175 ntBASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.93□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-1290P-201ENST00000362957 109 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 RNU4-58P-201ENST00000363192 141 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 RNA5SP325-201ENST00000363756 130 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 RNU4-67P-201ENST00000364569 141 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.507-201ENST00000384500 99 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-476P-201ENST00000384726 107 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-1307P-201ENST00000391012 103 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-1064P-201ENST00000410626 104 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-521P-201ENST00000516663 105 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
MBD3L4A6NDZ8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 RNY1P2-201ENST00000364820 117 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-1144P-201ENST00000384247 104 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 MIR573-201ENST00000384964 99 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 MIR605-201ENST00000385078 83 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 SNORA7.5-201ENST00000410672 110 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 RNA5SP436-201ENST00000516020 115 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 AC090897.1-201ENST00000580909 226 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 AP001362.1-201ENST00000625165 124 ntBASIC0.91□□□□□ -2.26
MBD3L4A6NDZ8 RNU6-834P-201ENST00000362367 110 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 SNORA63.5-201ENST00000363548 123 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.155-201ENST00000363632 101 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 RNU6-1056P-201ENST00000383996 107 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 SNORD116-21-201ENST00000384507 92 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.549-201ENST00000384657 102 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 MIR1285-1-201ENST00000408593 84 ntBASIC0.9□□□□□ -2.27
MBD3L4A6NDZ8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 279.9 ms