Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR4666B-201ENST00000578142 81 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 MIR4648-201ENST00000580107 72 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 MIR4491-201ENST00000581087 68 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 AC104984.5-201ENST00000586878 94 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 MIR548BB-201ENST00000626714 66 ntBASIC1.71□□□□□ -2.14
SHISA3A0PJX4 RNU1-36P-201ENST00000365130 165 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 RNU6-519P-201ENST00000410590 108 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 RNU4-83P-201ENST00000410863 133 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 BX276092.1-201ENST00000427368 251 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 RN7SKP88-201ENST00000516847 250 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 7SK.8-201ENST00000612110 250 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 7SK.11-201ENST00000615477 250 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 7SK.13-201ENST00000622040 250 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 AC006160.2-201ENST00000637708 154 ntBASIC1.7□□□□□ -2.14
SHISA3A0PJX4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SHISA3A0PJX4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.69□□□□□ -2.14
SHISA3A0PJX4 MIR934-201ENST00000401241 83 ntBASIC1.69□□□□□ -2.14
SHISA3A0PJX4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.69□□□□□ -2.14
SHISA3A0PJX4 RPS27P16-201ENST00000425758 201 ntBASIC1.69□□□□□ -2.14
SHISA3A0PJX4 RNU1-41P-201ENST00000516161 162 ntBASIC1.69□□□□□ -2.14
SHISA3A0PJX4 RNU1-48P-201ENST00000516400 162 ntBASIC1.69□□□□□ -2.14
SHISA3A0PJX4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
SHISA3A0PJX4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.68□□□□□ -2.14
SHISA3A0PJX4 SNORD113.3-201ENST00000364630 78 ntBASIC1.68□□□□□ -2.14
SHISA3A0PJX4 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
SHISA3A0PJX4 MIR519C-201ENST00000385053 87 ntBASIC1.68□□□□□ -2.14
SHISA3A0PJX4 MIR676-201ENST00000390702 67 ntBASIC1.68□□□□□ -2.14
SHISA3A0PJX4 AC012493.3-201ENST00000604494 112 ntBASIC1.68□□□□□ -2.14
SHISA3A0PJX4 MIR6715A-201ENST00000615929 79 ntBASIC1.68□□□□□ -2.14
SHISA3A0PJX4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SHISA3A0PJX4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SHISA3A0PJX4 MIR1257-201ENST00000408490 117 ntBASIC1.67□□□□□ -2.14
SHISA3A0PJX4 RNU7-185P-201ENST00000459215 60 ntBASIC1.67□□□□□ -2.14
SHISA3A0PJX4 snoU13.26-201ENST00000459452 105 ntBASIC1.67□□□□□ -2.14
SHISA3A0PJX4 Y_RNA.648-201ENST00000459455 110 ntBASIC1.67□□□□□ -2.14
SHISA3A0PJX4 AC048334.1-201ENST00000477975 159 ntBASIC1.67□□□□□ -2.14
SHISA3A0PJX4 RNU6-531P-201ENST00000516694 104 ntBASIC1.67□□□□□ -2.14
SHISA3A0PJX4 MIR514B-201ENST00000516774 80 ntBASIC1.67□□□□□ -2.14
SHISA3A0PJX4 RNU6-787P-201ENST00000384032 107 ntBASIC1.66□□□□□ -2.14
SHISA3A0PJX4 RNU6-1254P-201ENST00000391266 104 ntBASIC1.66□□□□□ -2.14
SHISA3A0PJX4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.66□□□□□ -2.14
SHISA3A0PJX4 AC087499.7-201ENST00000441958 109 ntBASIC1.66□□□□□ -2.14
SHISA3A0PJX4 SNORA31.2-201ENST00000516019 134 ntBASIC1.66□□□□□ -2.14
SHISA3A0PJX4 RNA5SP395-201ENST00000516567 118 ntBASIC1.66□□□□□ -2.14
SHISA3A0PJX4 SNORA25.16-201ENST00000516741 121 ntBASIC1.66□□□□□ -2.14
SHISA3A0PJX4 RNU6-902P-201ENST00000517212 91 ntBASIC1.66□□□□□ -2.14
SHISA3A0PJX4 SNORA72.6-201ENST00000384520 129 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 SNORD111-201ENST00000408139 94 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 MIR1255A-201ENST00000408338 113 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 SNORD4B-201ENST00000459083 72 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 RNU6-765P-201ENST00000516916 99 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 AC036111.3-201ENST00000526389 112 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
SHISA3A0PJX4 RNU7-10P-201ENST00000607194 63 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
SHISA3A0PJX4 AC023934.1-201ENST00000574529 2389 ntBASIC1.65□□□□□ -2.15
SHISA3A0PJX4 RNU6-403P-201ENST00000363163 104 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 SNORD115-37-201ENST00000363768 82 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 SNORD115-27-201ENST00000364430 82 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 Y_RNA.437-201ENST00000384113 113 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 SNORA64-201ENST00000384674 134 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 SNORA75.2-201ENST00000391138 150 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 SNORA75.3-201ENST00000391231 150 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 RNU6-279P-201ENST00000391297 101 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 AC093729.1-201ENST00000513074 128 ntBASIC1.64□□□□□ -2.15
SHISA3A0PJX4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
SHISA3A0PJX4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHISA3A0PJX4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SHISA3A0PJX4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHISA3A0PJX4 AL161722.3-201ENST00000605789 2983 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 SNORD36A-201ENST00000362874 73 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 RNU6-934P-201ENST00000365154 107 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 RNU6-243P-201ENST00000391140 107 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 MIR1236-201ENST00000408340 102 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 AL591704.2-201ENST00000421658 181 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 snoU13.15-201ENST00000459407 104 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 AC106800.4-201ENST00000614905 153 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 MIR219B-201ENST00000637023 88 ntBASIC1.63□□□□□ -2.15
SHISA3A0PJX4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SHISA3A0PJX4 MIR101-2-201ENST00000362195 79 ntBASIC1.62□□□□□ -2.15
SHISA3A0PJX4 MIR504-201ENST00000385065 83 ntBASIC1.62□□□□□ -2.15
SHISA3A0PJX4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SHISA3A0PJX4 MIR548H5-201ENST00000580314 60 ntBASIC1.62□□□□□ -2.15
SHISA3A0PJX4 MIR6082-201ENST00000613604 109 ntBASIC1.62□□□□□ -2.15
SHISA3A0PJX4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
SHISA3A0PJX4 SNORA80D-201ENST00000384488 135 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 MIR516A2-201ENST00000384888 90 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 MIR516A1-201ENST00000385033 90 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 MIR519A1-201ENST00000385257 85 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 RNA5SP225-201ENST00000410874 135 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 RNU7-85P-201ENST00000458851 63 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 snoU13.21-201ENST00000459368 105 ntBASIC1.61□□□□□ -2.15
SHISA3A0PJX4 RNU7-21P-201ENST00000459430 62 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms