Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 SNORD100-201ENST00000408573 76 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 MIR1283-2-201ENST00000408621 87 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 AL606490.4-201ENST00000423117 127 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 RNU6-752P-201ENST00000516376 102 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 SNORD111.1-201ENST00000516421 86 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 MIR4491-201ENST00000581087 68 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 ZNF658B-202ENST00000615961 3375 ntBASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC61Q9Y6R9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC61Q9Y6R9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC61Q9Y6R9 RNU7-62P-201ENST00000458856 62 ntBASIC3.54□□□□□ -1.84
CCDC61Q9Y6R9 RNU6-274P-201ENST00000459566 107 ntBASIC3.54□□□□□ -1.84
CCDC61Q9Y6R9 RPS27P29-201ENST00000463110 252 ntBASIC3.54□□□□□ -1.84
CCDC61Q9Y6R9 TRAJ51-201ENST00000504127 63 ntBASIC3.54□□□□□ -1.84
CCDC61Q9Y6R9 AL109933.3-201ENST00000619095 188 ntBASIC3.54□□□□□ -1.84
CCDC61Q9Y6R9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC61Q9Y6R9 RNA5SP432-201ENST00000362480 116 ntBASIC3.53□□□□□ -1.84
CCDC61Q9Y6R9 RNU6-1260P-201ENST00000362944 107 ntBASIC3.53□□□□□ -1.84
CCDC61Q9Y6R9 RNU6-654P-201ENST00000364373 107 ntBASIC3.53□□□□□ -1.84
CCDC61Q9Y6R9 SNORA31.15-201ENST00000516771 132 ntBASIC3.53□□□□□ -1.84
CCDC61Q9Y6R9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC61Q9Y6R9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-1079P-201ENST00000362861 110 ntBASIC3.52□□□□□ -1.85
CCDC61Q9Y6R9 MIR653-201ENST00000385279 96 ntBASIC3.52□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-935P-201ENST00000410371 100 ntBASIC3.52□□□□□ -1.85
CCDC61Q9Y6R9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 SNORA16B-201ENST00000364674 135 ntBASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 DEFB122-202ENST00000569013 197 ntBASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 U6.100-201ENST00000636230 99 ntBASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
CCDC61Q9Y6R9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 SNORD93-201ENST00000408813 74 ntBASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 RNU4-53P-201ENST00000410828 140 ntBASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 MTND4LP1-201ENST00000446263 157 ntBASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 AC092634.7-201ENST00000621022 103 ntBASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 MIR4773-1-201ENST00000637203 78 ntBASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-1052P-201ENST00000411398 104 ntBASIC3.49□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-542P-201ENST00000516405 103 ntBASIC3.49□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-719P-201ENST00000516671 104 ntBASIC3.49□□□□□ -1.85
CCDC61Q9Y6R9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-1335P-201ENST00000365426 107 ntBASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 MIR627-201ENST00000384979 97 ntBASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 MIR451A-201ENST00000385059 72 ntBASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 MT-TN-201ENST00000387400 73 ntBASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 MIR2115-201ENST00000516657 100 ntBASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 MIR514B-201ENST00000516774 80 ntBASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 AP000942.3-201ENST00000603702 160 ntBASIC3.48□□□□□ -1.85
CCDC61Q9Y6R9 U8.2-201ENST00000363156 134 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-403P-201ENST00000363163 104 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 SNORA25.3-201ENST00000363205 127 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-940P-201ENST00000363433 104 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 Y_RNA.588-201ENST00000391254 102 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 AL359511.1-201ENST00000402970 211 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 MIR466-201ENST00000580653 84 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 MTRNR2L2-201ENST00000604882 87 ntBASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC61Q9Y6R9 RNU6-668P-201ENST00000364180 107 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 RNU1-148P-201ENST00000384472 162 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 MIR518A2-201ENST00000384966 87 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 RNU6-1177P-201ENST00000391058 104 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 RNA5SP501-201ENST00000410990 112 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 AC244098.3-201ENST00000424803 96 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 RPL30P7-201ENST00000479312 323 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 MIR7978-201ENST00000636158 59 ntBASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC61Q9Y6R9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC61Q9Y6R9 snoU13.15-201ENST00000459407 104 ntBASIC3.45□□□□□ -1.86
CCDC61Q9Y6R9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC61Q9Y6R9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC61Q9Y6R9 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC61Q9Y6R9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC61Q9Y6R9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 Y_RNA.56-201ENST00000362798 112 ntBASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 SNORA25.5-201ENST00000363782 126 ntBASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 U8.13-201ENST00000390842 128 ntBASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 RNU6-360P-201ENST00000390944 104 ntBASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 MIR1302-7-201ENST00000408841 72 ntBASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 Z96811.1-201ENST00000445880 108 ntBASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC61Q9Y6R9 RNA5SP117-201ENST00000365294 118 ntBASIC3.43□□□□□ -1.86
CCDC61Q9Y6R9 AC092427.1-202ENST00000430569 476 ntBASIC3.43□□□□□ -1.86
CCDC61Q9Y6R9 snoU13.26-201ENST00000459452 105 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 298.3 ms