Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 RNU6-705P-201ENST00000410601 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1100P-201ENST00000410691 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-860P-201ENST00000410860 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1217P-201ENST00000411276 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-785P-201ENST00000411324 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 AC022137.1-201ENST00000483735 151 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 Y_RNA.685-201ENST00000516532 108 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 AC103810.8-201ENST00000607347 118 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 U6.90-201ENST00000614007 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 IGLL4P-201ENST00000614590 133 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 U6.70-201ENST00000620287 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD58A-201ENST00000383875 65 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-439P-201ENST00000384188 106 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 snoU13.18-201ENST00000459483 104 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 SNORA44.1-201ENST00000517031 108 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 SEPT14P17-201ENST00000617978 177 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
PCDHA11Q9Y5I1 RNY1P13-201ENST00000365030 105 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-1237P-201ENST00000384777 107 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 SNORD78.1-201ENST00000390866 65 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-402P-201ENST00000410678 103 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 RNU7-48P-201ENST00000458875 63 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 SNORA77B-201ENST00000578179 125 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-86P-201ENST00000606534 107 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 AC103810.7-201ENST00000607821 91 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 MIR8081-201ENST00000611533 95 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 AC105081.1-201ENST00000617727 106 ntBASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHA11Q9Y5I1 Y_RNA.73-201ENST00000362910 113 ntBASIC2□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-219P-201ENST00000364728 107 ntBASIC2□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-638P-201ENST00000516582 104 ntBASIC2□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-922P-201ENST00000516753 99 ntBASIC2□□□□□ -2.09
PCDHA11Q9Y5I1 AC141846.1-201ENST00000568348 142 ntBASIC2□□□□□ -2.09
PCDHA11Q9Y5I1 MIR4303-201ENST00000581299 66 ntBASIC2□□□□□ -2.09
PCDHA11Q9Y5I1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2□□□□□ -2.09
PCDHA11Q9Y5I1 Y_RNA.98-201ENST00000363109 102 ntBASIC1.99□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-1244P-201ENST00000363614 108 ntBASIC1.99□□□□□ -2.09
PCDHA11Q9Y5I1 MIR548G-201ENST00000408442 89 ntBASIC1.99□□□□□ -2.09
PCDHA11Q9Y5I1 RNA5SP237-201ENST00000410414 113 ntBASIC1.99□□□□□ -2.09
PCDHA11Q9Y5I1 MIR3192-201ENST00000584920 77 ntBASIC1.99□□□□□ -2.09
PCDHA11Q9Y5I1 AL357312.1-201ENST00000603879 298 ntBASIC1.99□□□□□ -2.09
PCDHA11Q9Y5I1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 SNORD38.2-201ENST00000384470 69 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 MIR30A-201ENST00000385092 71 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 RPL39P39-201ENST00000455840 151 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 AC015688.6-201ENST00000577737 104 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 MIR4668-201ENST00000582284 70 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 BX248123.2-201ENST00000606318 124 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-90P-201ENST00000606352 106 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 AL662814.1-201ENST00000617364 121 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 AP001362.1-201ENST00000625165 124 ntBASIC1.98□□□□□ -2.09
PCDHA11Q9Y5I1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-242P-201ENST00000384359 107 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 Y_RNA.567-201ENST00000384736 106 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 Y_RNA.620-201ENST00000411009 88 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 AC244023.1-201ENST00000426884 112 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 RNU6-267P-201ENST00000516714 103 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 AC242498.1-201ENST00000604134 111 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 AL512598.1-201ENST00000610158 273 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 AL096861.1-201ENST00000610899 123 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 MIR3202-2-201ENST00000635980 79 ntBASIC1.97□□□□□ -2.09
PCDHA11Q9Y5I1 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-497P-201ENST00000365316 104 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-1276P-201ENST00000365372 104 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 MIR1302-7-201ENST00000408841 72 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 SPINT5P-201ENST00000448174 155 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 snoU13.2-201ENST00000459201 104 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 RNU7-95P-201ENST00000459222 64 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 MIR502-201ENST00000606349 86 ntBASIC1.96□□□□□ -2.1
PCDHA11Q9Y5I1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-228P-201ENST00000362700 106 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 Y_RNA.173-201ENST00000363776 113 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-979P-201ENST00000383896 107 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 RNU6-949P-201ENST00000384040 107 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 AC027119.1-201ENST00000440877 241 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 HSPE1P24-201ENST00000450782 238 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 RPS29P11-201ENST00000496507 171 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 MIR5588-201ENST00000581890 63 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.95□□□□□ -2.1
PCDHA11Q9Y5I1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms