Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC008163.1-202ENST00000636004 2889 ntBASIC2.45□□□□□ -2.02
PCDHB9Q9Y5E1 Y_RNA.94-201ENST00000363068 106 ntBASIC2.44□□□□□ -2.02
PCDHB9Q9Y5E1 Y_RNA.119-201ENST00000363301 96 ntBASIC2.44□□□□□ -2.02
PCDHB9Q9Y5E1 RPL30P7-201ENST00000479312 323 ntBASIC2.44□□□□□ -2.02
PCDHB9Q9Y5E1 RNU11-2P-201ENST00000516898 142 ntBASIC2.44□□□□□ -2.02
PCDHB9Q9Y5E1 RNU6-548P-201ENST00000517083 115 ntBASIC2.44□□□□□ -2.02
PCDHB9Q9Y5E1 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
PCDHB9Q9Y5E1 MIR6516-201ENST00000630554 81 ntBASIC2.44□□□□□ -2.02
PCDHB9Q9Y5E1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 MIR377-201ENST00000362145 69 ntBASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 SNORD115-37-201ENST00000363768 82 ntBASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 MT-TF-201ENST00000387314 71 ntBASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 AL133373.1-201ENST00000497098 94 ntBASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 AC140658.3-201ENST00000567603 271 ntBASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 AL512598.1-201ENST00000610158 273 ntBASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDHB9Q9Y5E1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHB9Q9Y5E1 MIR1185-1-201ENST00000408598 86 ntBASIC2.42□□□□□ -2.02
PCDHB9Q9Y5E1 SNORD4B-201ENST00000459083 72 ntBASIC2.42□□□□□ -2.02
PCDHB9Q9Y5E1 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
PCDHB9Q9Y5E1 RNU6-947P-201ENST00000516264 106 ntBASIC2.42□□□□□ -2.02
PCDHB9Q9Y5E1 RNA5SP82-201ENST00000516707 92 ntBASIC2.42□□□□□ -2.02
PCDHB9Q9Y5E1 MIR1291-201ENST00000627649 87 ntBASIC2.42□□□□□ -2.02
PCDHB9Q9Y5E1 AC121758.2-201ENST00000553271 193 ntBASIC2.41□□□□□ -2.02
PCDHB9Q9Y5E1 MIR4712-201ENST00000583750 82 ntBASIC2.41□□□□□ -2.02
PCDHB9Q9Y5E1 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
PCDHB9Q9Y5E1 uc_338.6-201ENST00000613544 171 ntBASIC2.41□□□□□ -2.02
PCDHB9Q9Y5E1 AL353997.5-201ENST00000618886 171 ntBASIC2.41□□□□□ -2.02
PCDHB9Q9Y5E1 MIR4662A-201ENST00000637499 67 ntBASIC2.41□□□□□ -2.02
PCDHB9Q9Y5E1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.41□□□□□ -2.02
PCDHB9Q9Y5E1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
PCDHB9Q9Y5E1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
PCDHB9Q9Y5E1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
PCDHB9Q9Y5E1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.4□□□□□ -2.02
PCDHB9Q9Y5E1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 RNA5SP99-201ENST00000364020 114 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 MIR764-201ENST00000390811 85 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 MIR1236-201ENST00000408340 102 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 BX276092.1-201ENST00000427368 251 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 AC245517.4-201ENST00000448601 281 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 Y_RNA.648-201ENST00000459455 110 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 MIR4287-201ENST00000579398 78 ntBASIC2.4□□□□□ -2.03
PCDHB9Q9Y5E1 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
PCDHB9Q9Y5E1 SNORD114-1-201ENST00000362705 72 ntBASIC2.39□□□□□ -2.03
PCDHB9Q9Y5E1 RNU7-85P-201ENST00000458851 63 ntBASIC2.39□□□□□ -2.03
PCDHB9Q9Y5E1 RNA5SP458-201ENST00000516188 119 ntBASIC2.39□□□□□ -2.03
PCDHB9Q9Y5E1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHB9Q9Y5E1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
PCDHB9Q9Y5E1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHB9Q9Y5E1 AL596028.1-201ENST00000326971 197 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 MIR103A2-201ENST00000362154 78 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 MIR302D-201ENST00000362275 68 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 RNA5SP264-201ENST00000363115 107 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 RPL23AP42-201ENST00000471152 471 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 MIR4299-201ENST00000577899 72 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
PCDHB9Q9Y5E1 RNU6-776P-201ENST00000364403 104 ntBASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 RNU6-1022P-201ENST00000365049 104 ntBASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 RNU7-153P-201ENST00000516455 62 ntBASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 SNRPGP19-201ENST00000603826 189 ntBASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 MIR8063-201ENST00000621930 81 ntBASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PCDHB9Q9Y5E1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHB9Q9Y5E1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
PCDHB9Q9Y5E1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHB9Q9Y5E1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHB9Q9Y5E1 RNU6-580P-201ENST00000365159 107 ntBASIC2.36□□□□□ -2.03
PCDHB9Q9Y5E1 AC103810.8-201ENST00000607347 118 ntBASIC2.36□□□□□ -2.03
PCDHB9Q9Y5E1 RNU4-32P-201ENST00000363404 141 ntBASIC2.35□□□□□ -2.03
PCDHB9Q9Y5E1 RNU6-654P-201ENST00000364373 107 ntBASIC2.35□□□□□ -2.03
PCDHB9Q9Y5E1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.35□□□□□ -2.03
PCDHB9Q9Y5E1 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
PCDHB9Q9Y5E1 SNORA25.13-201ENST00000516395 103 ntBASIC2.35□□□□□ -2.03
PCDHB9Q9Y5E1 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
PCDHB9Q9Y5E1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB9Q9Y5E1 AL603825.1-201ENST00000438481 80 ntBASIC2.34□□□□□ -2.03
PCDHB9Q9Y5E1 MIR18B-201ENST00000454574 71 ntBASIC2.34□□□□□ -2.03
PCDHB9Q9Y5E1 snoU13.9-201ENST00000458927 103 ntBASIC2.34□□□□□ -2.03
PCDHB9Q9Y5E1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHB9Q9Y5E1 MIR4491-201ENST00000581087 68 ntBASIC2.34□□□□□ -2.03
PCDHB9Q9Y5E1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.34□□□□□ -2.04
PCDHB9Q9Y5E1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 SNORD36A-201ENST00000362874 73 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 RNU6-53P-201ENST00000365367 106 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 SNORA72.6-201ENST00000384520 129 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 Y_RNA.588-201ENST00000391254 102 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 RNA5SP95-201ENST00000410319 137 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 AC005908.1-201ENST00000468701 347 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 MIR5007-201ENST00000583098 95 ntBASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHB9Q9Y5E1 AC131280.1-202ENST00000624067 4211 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms